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Information for unigene UN03293
| FASTA Sequence |
| Unigene ID: UN03293 | Length: 1236 |
SSR | | AGCTCTTCATCGAGATTTCTGGTTGTGCGTGGTTGAGTTTTCTGGGCTTTCGAGTTTCGATCGCCCTCTCTCTCCCAACAGAGAAA
GAAAGCTTCGAGCTCGAGAGAGAGAGAATCCATGGATTCCTCGCCGGTTCAGAGTCGATTCGATATATTCGAAATATATCGCAGAT
TTTGTGAGACTCGATCAAGCCAAGCTTTATGTACTACTTATAAACACGACGAGGAGTCACACAGAAGTAATAATTATTCTAAAGAA
GCTTTAACTCACCTCTTTAGTCTAGTCGAGACCAAGTTTCAGGCAAGAAACTCCATTTTTGATGAATTGTTCAAGTTGATGTCACG
TCTGGACTTAATGGTGGACTTCTCCGAGTTTACCCGCTTTTATGATTTTGTTTTCTTTATGTGCCGTGAGAATGGGCAGAAGAGTA
TAACTGTAGCTAAAGCTATTACCGCATGGAAACTTGTTTTGGTTGGGAGATTTAGATTACTTAACCGCTGGTGCGACTTCATCGAG
AAAAACCAACGGCACAATATTTCAGAAGATACCTGGCAGCAAGTCTTGGCGTTTAGTCGTTGTGTTCATGAGAATCTCGAAGGATA
TGACTCTGAAGGTGCGTGGCCTGTCCTCATCGATGAGTTTGTTGAGCATATGTACAGTGTTCTAGGACCGAGTAAGAACACTAGCT
TGTCCTGTAACTGTGGGGACACAGACTCTGAATCATGCCTTTACGAAGATCCTCTTTCAGATAAGCATCATAAAGATGATCGCCGC
TACCACACGGGTTTAAGAAGTGTTCCAGGCTTAAAGAGAAAAACATCCAAAGACTACGATGAAGAAGAAGATGATGAAGAAGTATC
TAAAACTCAATACTCTTTTTCGTCACCATACTTTGAACGAATGAGATCATCCGAGGACAGTCCAAGATGTTCATCCAACTCGCATT
GTATGATTGAGCGAAGTCTCTCACAAGGATTTGCAAGTCTTTTATCGACTGGAGATAAGCCGTGAAACTCAAGAAACCGTCACACA
TAAGCAAAATAGAGATTATATACTACAAAACAAAAAGAGGTCTCGAGTTAACGGTGAGTTCTTATTTGTTGTGAGCTATATAATAT
TTGTTTCCCAATCTATTTATACACTTGTTTCCATTACATTTTCGAGTTTCAGAGCAAAAAAAGAAGATTGTATTATGTTCGATTGT
TCGTTGTGTTATTCAATGTTGAGTTTTCTTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189539 uncharacterized protein [Arabidopsis thaliana] | 1176 | 1e-126 |
| XP_002877147 hypothetical protein ARALYDRAFT_347271 [Arabidopsis lyrata subsp. lyrata] | 880 | 3e-092 |
| XP_002324063 predicted protein [Populus trichocarpa] | 774 | 6e-080 |
| XP_002531855 conserved hypothetical protein [Ricinus communis] | 759 | 3e-078 |
| XP_002283688 PREDICTED: hypothetical protein [Vitis vinifera] | 710 | 2e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9VUQ8 DCN1-like protein | 256 | 3e-021 |
| Q6PH85 DCN1-like protein 2 | 247 | 3e-020 |
| Q8BZJ7 DCN1-like protein 2 | 237 | 5e-019 |
| Q5ZKU1 DCN1-like protein 1 | 235 | 8e-019 |
| Q96GG9 DCN1-like protein 1 | 235 | 8e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9MBG8 Genomic DNA, chromosome 3, TAC clone:K5K13 | 1176 | 1e-126 |
| B9IJZ0 Predicted protein | 774 | 4e-080 |
| B9T0T6 Putative uncharacterized protein | 759 | 2e-078 |
| A5C832 Putative uncharacterized protein | 633 | 9e-064 |
| B9H0B8 Predicted protein | 567 | 4e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28970.1 AAR3 (antiauxin-resistant 3) | 1189 | 2e-130 |
| AT3G12760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15860.2); Has 628 Blast hits to 626 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 99; Plants - 64; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). | 254 | 5e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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