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Information for unigene UN03339
| FASTA Sequence |
| Unigene ID: UN03339 | Length: 1311 |
SSR | | TTTTTCTTCCATCACGCCGACGAAGTTAGATATAATAATAACATCTATATGTGATGGAAGAAATTGCTCTTTGCAATATTATTTGA
TGAAGAAGGGATGGTAGTGAGATGGGAAGGAGGAGTGATGAGATGTCTCGAGGAGTAGGAGATGAAGGAGAGGCAACGTTGGAGTG
GGGAAGAAGATGCATTGCTACGTTCCTACGTGAGACAGTTCGGTCCTAGAGAATGGCATCTAGTCTCTGAGCGTATGAACAAGCCT
TTGAACCGTGACGCTAAGTCTTGTCTTGAGAGATGGAAGAACTATCTTAAGCCAGGGATCAAGAAAGGGTCGTTGACCGAGGAAGA
GCAGAGGCTCGTGATACGTTTGCAGGAGAAACACGGCAACAAGTGGAAGAAGATAGCTGCTGAGGTTCCAGGGAGGACGGCGAAAC
GGTTAGGGAAGTGGTGGGAAGTGTTTAAGGAGAAGCAACAGAGAGAAGAGAAAGAGAGTAACAAGAGAGTTGAGCCTATTGACGAG
AGTAAGTACGATAGGATTCTCGAGAGTTTCGCTGAGAAGCTTGTCAAAGAGAGGTCAGCTAACAGCGTTGGCTCTGTTTCTGTCTC
TGTTCCTACGGTCATGGCTAGTTCAAACGGAGGGTTTCTACATTCTGATCAACAAGTTCCTCCTCCTCCTCCTTCTAATAATCATG
TGCTCCCGCCTTGGTTAGCTACTTCTAACAACGGGAGCAATGTTGTTGCTAGACCTCCCTCGGTGACTCTTACTCTATCGCCTTCC
ACCGGGGCTGCAGCTTCTCCACAACAGCCTATCCCATGGCTGCAGCAGCAGCCTGAGGCCAGCTCTGGAGGTCTTGTGTTAGGTAG
TATGGTGCCGTCTTGTAGCGGTAGTAATGAGTGTGTTCATGTCAGAGCTTGTGGAGTGTTGTAGGGAGTTGGAGGGAGGGCACAGA
GCTTGGGCAGAGCATAAGAAGGAGGCGGCTTGGAGGCTAAGGAGATTAGAGCTGCAGCTAGAGTCAGAGAAGACAAGTAGACAAAG
GGAGAAGACGGAAGAGATTGAAGCAAAGATGAAGGCTCTGAGGGAAGAGCAGAAGATTGCAATGGAGAAGATTGAAGGAGAGTATA
GAGAACAGCTTGTTGGGTTGAGGAGAGACGCCGAGGCCAAGGACCAGAAACTTGCTGATCAATGGACCTCTAAGCATAACAGACTC
AATAAGTTTCTTGAACAACACATGAGCTGCAGGCAGAGACTATTATGATCTCTTTCTTGTCCTCTTTCTTTTGTAATGTAATGTAA
ATTAAGCTATTTTTTTTCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181299 transcription factor AS1 [Arabidopsis thaliana] | 1110 | 7e-119 |
| XP_002881519 hypothetical protein ARALYDRAFT_321463 [Arabidopsis lyrata subsp. lyrata] | 1110 | 7e-119 |
| XP_002881522 hypothetical protein ARALYDRAFT_902907 [Arabidopsis lyrata subsp. lyrata] | 1110 | 7e-119 |
| ABF59515 asymmetric leaves 1 [Cardamine hirsuta] | 1064 | 2e-113 |
| XP_002533297 asymmetric leaves1 and rough sheath, putative [Ricinus communis] | 849 | 1e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80931 Transcription factor AS1 | 1110 | 3e-120 |
| Q9S7B2 Protein rough sheath 2 | 599 | 5e-061 |
| Q94IB1 Protein rough sheath 2 homolog | 538 | 6e-054 |
| Q4JL84 Transcription factor MYB59 | 257 | 2e-021 |
| Q9LX82 Transcription factor MYB48 | 256 | 3e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0Q6R9 Asymmetric leaves 1 | 1064 | 1e-113 |
| B9T4X8 Asymmetric leaves1 and rough sheath, putative | 849 | 9e-089 |
| B9HBM2 Predicted protein | 799 | 6e-083 |
| Q9FUK9 MYB-related transcription factor PHAN1 | 785 | 2e-081 |
| Q4VPE6 Phantastica transcription factor a | 771 | 1e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G37630.1 AS1 (ASYMMETRIC LEAVES 1); DNA binding / protein homodimerization/ transcription factor | 1110 | 3e-121 |
| AT5G59780.3 MYB59 (MYB DOMAIN PROTEIN 59); DNA binding / transcription factor | 257 | 2e-022 |
| AT3G46130.1 MYB111 (MYB DOMAIN PROTEIN 111); DNA binding / transcription factor | 256 | 3e-022 |
| AT1G25340.1 MYB116 (myb domain protein 116); DNA binding / transcription factor | 249 | 2e-021 |
| AT1G68320.1 MYB62 (myb domain protein 62); DNA binding / transcription factor | 249 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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