Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN03353

FASTA Sequence
Unigene ID: UN03353Length: 1202  SNP
GCACTGTCCATGATGTTGTTCTCGTCGGTGTCTCTACACGTATCCCAAAAGTTCAGCAGCTTCTCCAAGATTTCTTCAACGGTAAA
GAGCTCTGCAAGTCTATTAACCCGGACGAGGCCGTGGCTTATGGTGCAGCGGTTCAGGGTGCTATTCTGAGCGGTGAAGGGAACGA
GAAGGTTCAGGACCTTCTTCTCTTGGATGTTACTCCTCTTTCTCTCGGTCTTGAGACTGCCGGTGGAGTCATGACCACCTTGATCC
AAAGGAACACAACTATCCCGACCAAAAAGGAGCAGGTCTTCTCCACTTATTCCGACAACCAGCCTGGTGTGTTGATCCAAGTCTAC
GAAGGTGAGAGGGCTAGGACCAAGGACAACAACCTTCTCGGAAAGTTCGAGCTCTCTGGCATTCCTCCTGCTCCACGTGGTGTCCC
TCAGATCACAGTCTGTTTCGATATTGATGCAAACGGTATCCTCAACGTCTCTGCCGAGGACAAGACCACCGGTCAAAAGAACAAGA
TCACCATCACCAACGACAAGGGTCGCTTGTCTAAAGACGAGATTGAGAAGATGGTGCAAGAGGCTGAGAAGTACAAGTCTGAGGAT
GAGGAGCACAAGAAGAAGGTGGAGGCCAAGAATGCTCTTGAGAACTATGCTTACAACATGAGGAACACCATTCGTGATGACAAGAT
TGGTGAGAAGCTTCCTGCTGCAGACAAGAAGAAGATTGAGGATTCGGTTGAGGAAGCTATCCAGTGGCTTGATGGTAACCAGACTG
CTGAAGCAGATGAGTTTGAGGACAAGATGAAGGAGTTGGAGAGTGTTTGCAACCCCATCATTGCGAAGATGTACCAAGGAGCTGGT
GGTGAGGCAGGTGGTCCCGCTGGAATGGATGACGATGAAGCTCCTCCTTCTACCGGAGGTGCTGGCCCCAAGATTGAGGAAGTCGA
CTAATCTTGTTATGTTTACATGATTTTGGCTTGATTTTCAGTATCGGTTTATGTTTGGTTCTATTTGAGCCATGTACTCTCTATTT
CTGTTGAACCTTTTTCTATATTTTTAAACTAGAGTAATCAATTGTCATGCCCGCATGGATATGTATTTTTAAACTAGAGATTGGAA
GCTGATTTAATCTCTCAAATACCCGCATGGATATGGATATGTATCTTATTTTTATTCTATGTTGTTTTCCTGTGGGGCTAATGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195870 heat shock 70kDa protein 1/8 [Arabidopsis thaliana]15391e-168
CAA52684 heat shock protein 70 cognate [Arabidopsis thaliana]15391e-168
XP_002873055 predicted protein [Arabidopsis lyrata subsp. lyrata]15353e-168
XP_002873056 HSC70-1 [Arabidopsis lyrata subsp. lyrata]15327e-168
NP_195869 heat shock protein 70 [Arabidopsis thaliana]15273e-167

Swiss-Prot top hits (Blast detail)Scoree value
P22953 Heat shock cognate 70 kDa protein 115395e-170
P22954 Heat shock cognate 70 kDa protein 215271e-168
O65719 Heat shock cognate 70 kDa protein 314482e-159
P29357 Chloroplast envelope membrane 70 kDa heat shock-related protein14222e-156
P27322 Heat shock cognate 70 kDa protein 214015e-154

TrEMBL top hits (Blast detail)Scoree value
Q0WUQ6 DnaK-type molecular chaperone hsc70.1-like15272e-167
Q56WH2 DnaK-type molecular chaperone hsc70.1-like (Fragment)15236e-167
D6MMT2 Heat shock protein 7014635e-160
Q9LHA8 70 kDa heat shock protein14619e-160
Q9ZS55 Heat shock protein 7014554e-159

Arabidopsis top hits (Blast detail)Scoree value
AT5G02500.1 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding15403e-171
AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)15288e-170
AT3G12580.1 HSP70 (heat shock protein 70); ATP binding14624e-162
AT3G09440.1 heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)14543e-161
AT1G16030.1 Hsp70b (heat shock protein 70B); ATP binding12707e-140

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  38%
 
91  13%
 
102  25%
 
202  25%

Unigene MembersMember information