RadishBase

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Information for unigene UN03359

FASTA Sequence

Unigene ID: UN03359	Length: 710	SSR
GGGAGAGAGAGAGAGGAGAAAGAAGGCATGGAGACTGAGAGGGAAAAGCAGGATACTATCCTCCATCGAGCAGAAGGAAGAGTCCA AGGGGAACGAGGAGAATGTCAAGAGGATTCAGACTTACCGAAAGAGTTCAGTTCTGGTACTGAACGCAAGGAAGCTGCAGATCAGT CTCTTGAAGCCTACAAGGCTGCTGTTGCTGCTGCAGACACTGGTTTGGCACCTACGCATCCAGTTAGACTTGGCTTGGCTTTGAAC TTTTCTGTTTTCTACTACGAGATCTTAAACTCTCCTGAAAGCGCATGCCAATTGGCTAAGCAAGCATTTGACGATGCAATCGCTGA ACTTGACAGCCTCAACGAGGAGTCATACAAGGACAGCACTCTTATCATGCAGCTACTTAGAGACAATCTCACCCTGTGGACTTCTG ACCTCCCGGAGGAAGGAGAAGAGAAATCCAAAGGTGATGAGCCGAAAGAAGAGAACTGAATCCTCTGTGTGAAGAGAAACGACCTT TGATGCATCCGAAGACAGCAAGTGTCGTTGCTCGGAAAAATGTGTATTTTTTTTTTAATTTTATCGTCTTTCTTTATCATGTTTTT CAGATATTTGACGTTTTACAACATACTACTACTGCATAACTTCGAATGCTTGATGTCATACACTTAGTTTGCTTTGTTGTTGTTGA ATTGAGACCATGCATTTTGGAC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
ACN73532 1433-1 [Brassica napus]	593	2e-059
ADO95305 14-3-3-like protein GF14 Epsilon [Eutrema salsugineum]	579	1e-057
XP_002893217 hypothetical protein ARALYDRAFT_313117 [Arabidopsis lyrata subsp. lyrata]	561	1e-055
NP_564167 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	551	2e-054
NP_849698 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	545	8e-054

Swiss-Prot top hits (Blast detail)	Score	e value
P48347 14-3-3-like protein GF14 epsilon	551	8e-056
Q41246 14-3-3-like protein	473	9e-047
P93212 14-3-3 protein 7	468	3e-046
Q96453 14-3-3-like protein D	468	3e-046
P93214 14-3-3 protein 9	458	5e-045

TrEMBL top hits (Blast detail)	Score	e value
C0KJK4 1433-1	593	2e-059
B9DFR1 AT1G22300 protein	545	6e-054
Q3ED73 Putative uncharacterized protein At1g22300.3	510	7e-050
B9RJK9 14-3-3 protein, putative	503	4e-049
A1XJ43 14-3-3-like protein	498	2e-048

Arabidopsis top hits (Blast detail)	Score	e value
AT1G22300.1 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	552	6e-057
AT1G22300.2 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	545	4e-056
AT1G22300.3 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	510	4e-052
AT1G34760.2 GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding	457	6e-046
AT2G42590.2 GRF9 (GENERAL REGULATORY FACTOR 9); calcium ion binding / protein binding / protein phosphorylated amino acid binding	452	2e-045

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	1			50%


12	1			50%

Unigene Members	Member information