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Information for unigene UN03363
| FASTA Sequence |
| Unigene ID: UN03363 | Length: 1412 |
SSR | | GGGGGACTGCTTTCTCGTACAAACGCAACGTCTTGGATCCTTCCGTTCTCCGAGTGAGAGAGAGAGAAAAAAGGAAGCACAGCCAT
GGCCTTTCCGTCGCAATTAAGCTTTCCATCATCTTTCACAACCATCTCCGTCGCGCCACGCCGCTTCAGCGTTAAAATGTCCAACC
AGTCACCAAAATCCATCTTCACCTCCGCCACAAAGCTACTCTGGGGCCCATCTCTCCCTCCGGGTCTACTCATCTCCACCGCTCGA
ACAGCCTGGTCCACCGTCTGGCACCTCATGATGACCCAGCTCGCTCCATCGGACTCATCCGGGTCATACACCCGACCCACTTCCCA
ATTCCGCCTCAACCCGACCCAATTCCCTTCCGCCGCTTCTTCGGAGCTCCATCTCTACGTCGGTCTCCCTTGCCCCTGGGCTCACA
GAGCGCTGCTCGTGCGCGCTCTCAAGGGTTTAGACGACGCCGTATCGGTTTCGGTCGCTTCACCGGGTCAAGACGGTTCGTGGGAG
TTCAAGGATAACAATATCCCGGTTAGGGATAAGGATAAACTTATACCGGGTTTGGATAAGGTTAACCGGTGTCGGAATCTGAAGGA
AGTGTACAAATCGAGAACCGGTGGTTATGATGGGAGATGTACAGTTCCGATGCTGTGGGACTCGAGGAAGAAAGATGTGCTCTGTA
ATGAAAGCTACGATATCATCGAGTTCTTCAACTCGGGTCTAAACGAATTCGCCAGAAACCCTAACTTGGATCTCACGCCACCAGAA
CTGAAAGGAAAGATTGAAACTTGGAATCAGATTGTGTACCCTAAAGTTAACAATGGCGTTTACAGGTGTGGATTTGCGCAGAGTCA
AGAAGCGTATGATGGAGCAGTGAATGAACTTTTTAGTACCTTTGATGAGATTGAAGATCACTTGGGTAGTAACAGATACTTATGTG
GAGAAAGGTTGACACTGGCTGATGTATGTCTCTTCACAACTCTGATTCGCTTTGATCCTGTTTACAACATTCTCTTCAAATGCACC
AAGAAAAAGCTCGTTGAGTACCCTAATCTTTACGGCTATTTGCGCGATATTTACCAAATTCCTGGTGTTGCCGCTACTTGTGATAT
TCCCGCTATAATGGATGGGTACTACAAAACGCTATTTCCTTTAAACGCAAGTGGAATCCAACCGGCCATTTCTTTATCTGGTGATC
AAGATTCTCTCTTGATTCCTCATCACAGAGACTCCGTGGGTAAAGCCGTTCAAGCACAGCATGCGGTTTAGAACGGTCGAAAACTG
TACCTAGTCGATGTGTACAAATATATGTAATGAATGAATCAAAGCTCTGGTTTTGTTCTGAACTGTGGATCACCCTTGTACATGAA
GAGAAGCGTTCTACAAATACTTTTAATGGGAGCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM61048 unknown [Arabidopsis thaliana] | 1799 | 1e-198 |
| XP_002863619 glutathione S-transferase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1799 | 1e-198 |
| NP_568632 Glutathione S-transferase family protein [Arabidopsis thaliana] | 1793 | 5e-198 |
| BAD44450 unknown protein [Arabidopsis thaliana] | 1788 | 2e-197 |
| BAB09060 unnamed protein product [Arabidopsis thaliana] | 1755 | 1e-193 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42620 Uncharacterized protein yqjG | 570 | 1e-057 |
| O94524 Glutathione S-transferase omega-like 2 | 418 | 6e-040 |
| P36156 Glutathione S-transferase omega-like 2 | 210 | 8e-016 |
| Q04806 Glutathione S-transferase omega-like 3 | 204 | 4e-015 |
| P48239 Glutathione S-transferase omega-like 1 | 186 | 5e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LG40 Putative uncharacterized protein | 1799 | 7e-199 |
| Q1H5B1 At5g44000 | 1793 | 3e-198 |
| Q67XY1 Putative uncharacterized protein At5g44000 | 1788 | 1e-197 |
| Q9FNC6 Genomic DNA, chromosome 5, P1 clone:MRH10 | 1755 | 9e-194 |
| B9IBB3 Predicted protein | 1330 | 2e-144 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G44000.1 glutathione S-transferase C-terminal domain-containing protein | 1794 | 1e-200 |
| AT4G19880.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45020.1); Has 1635 Blast hits to 1635 proteins in 489 species: Archae - 12; Bacteria - 905; Metazoa - 23; Fungi - 158; Plants - 57; Viruses - 0; Other Eukaryotes - 480 (source: NCBI BLink). | 615 | 7e-064 |
| AT5G45020.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19880.1); Has 1632 Blast hits to 1632 proteins in 489 species: Archae - 12; Bacteria - 907; Metazoa - 22; Fungi - 156; Plants - 57; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). | 598 | 7e-062 |
| AT5G44990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19880.1); Has 1632 Blast hits to 1632 proteins in 489 species: Archae - 12; Bacteria - 905; Metazoa - 23; Fungi - 156; Plants - 57; Viruses - 0; Other Eukaryotes - 479 (source: NCBI BLink). | 568 | 2e-058 |
| AT5G44990.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19880.1); Has 1632 Blast hits to 1632 proteins in 489 species: Archae - 12; Bacteria - 905; Metazoa - 23; Fungi - 156; Plants - 57; Viruses - 0; Other Eukaryotes - 479 (source: NCBI BLink). | 568 | 2e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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