 |
Information for unigene UN03425
| FASTA Sequence |
| Unigene ID: UN03425 | Length: 1342 |
SSR | | AAAACTTGTAACCATCAAACACAAGTTGCAAATAAAAAAAACTGAACAGTTCTGAATTTCCACAACGAAAAACAAAAACAGAACCT
TTCTTGAATCTAATAAAACAAACAATACTAAGTTATTATTATTATTCAATCACTGAGATTCACATCAGAATCATTGCCCATACCCT
CATCTTCACTCTCATGACCACCACCACCATCACGACGATGATTCTCTTCTTCCTCCTCATCCTCTTCACGTAGCCTAGCGATCTCA
GTCTGAGCTCTCTCCACAATCTGTTTCTTCTGCAACTCCAAATCTCTCTGAAACTCACCTCTCATCTTCTCCAACTCCTTCATCTG
CTCTTTCTTACTCTTCTCCATCTTCTCATAAACCTTCCCAAACCTCTCAACCGAATCCGCCAACAGCTTATACGACGCCGCGTCAT
CGTCCCCTTTCCTCCTCCTCCTCCTCTCATACTCAACCTCCTCCTCCTCATCATCATCCTCCTCCGAATCGCCAGGACTATCCATC
ATCTCATCAAACCCATTAGACTTCTCCAAATAAACCTTGGTGTTCATAAACACAAACTCCCCCGAATCAACCCCGCACGCTAAACC
GAACTCCGGTTTAGCCGAAGAACCGCCACCACCAAGCAACATATCCAGCTTGTTGAAAAACGACCACTTGCTCGAACCCAGACCAG
ACTTCTCCACCTTGACCCTCTCCTTCTTATACTTCCTCTTCAAGTTATCAACCATTCTCCGACACTGCGTCTCGGACCTCTCCGAC
CGAAGCTCCTCGCTGACTTTCTCCGCGACCTCGTTCCAGTCCTCGTTCCTCAAACTCCTCCGACCAAGCTGCAAGAACCTGTCTCC
CCACACTTCTAATAAGACAAACGCCTCTTGCTCGGCTTTCGCTTCGCTCGGACCGGAGGAGGAGAAGTCGTAACCGGAAGGAACCG
GTTTGGTCGGTTTAAGCCTCTTCTGAAACCGATGACTGTATCCTCCTCCTCCTCCTCCTCCTCCTCCGTCGTCTTCTTGCTCCTCC
TCGTCGTCGTCTTCTTCTTCTTCGTGGTAATACGCGTGGCGTTTGGGGATGGGTCGAGTGTACATAGGATGTGTTTGGCGATTCAG
AGGGTAAAACTTCTTCGGGTACCCGGTTTCGTCTTCACTGTCACCCATCTAAAGAAGAACGATAGAGAGAGAGAGAGAGAGAGATC
TAGGGTTTTGAATTTGAAATTAAGGTACCTGATTTTTCACCAACAGAGGAAGATCTTTGAGGGTTTTGGCTAGAGGAGTTGAGAAT
TGGTAGAAATTGAGGTTGTTAATGGCAGTCTAGGGGTAGAGAGATCTGCATA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883522 hypothetical protein ARALYDRAFT_899026 [Arabidopsis lyrata subsp. lyrata] | 1285 | 4e-139 |
| NP_189092 alcohol dehydrogenase transcription factor myb/SANT-like protein [Arabidopsis thaliana] | 1283 | 6e-139 |
| BAD95120 hypothetical protein [Arabidopsis thaliana] | 791 | 7e-082 |
| XP_002324407 predicted protein [Populus trichocarpa] | 755 | 1e-077 |
| XP_002281208 PREDICTED: hypothetical protein [Vitis vinifera] | 730 | 8e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q17RH7 Putative protein TPRXL | 148 | 1e-008 |
| Q7M732 Retrotransposon-like protein 1 | 127 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LV59 Genomic DNA, chromosome 3, P1 clone: MOB24 | 1283 | 4e-139 |
| Q570R3 Putative uncharacterized protein At3g24490 | 798 | 8e-083 |
| B9ILJ8 Predicted protein | 755 | 7e-078 |
| A5CA72 Putative uncharacterized protein | 730 | 6e-075 |
| B9RKU2 Transcription factor, putative | 708 | 2e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24490.1 transcription factor | 1289 | 5e-142 |
| AT3G11100.1 transcription factor | 304 | 8e-028 |
| AT5G05550.1 transcription factor | 286 | 1e-025 |
| AT5G05550.2 transcription factor | 286 | 1e-025 |
| AT1G54060.1 ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factor | 218 | 7e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
