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Information for unigene UN03438

FASTA Sequence
Unigene ID: UN03438Length: 791 SSR 
TTTTGGGGAAAAAGGTTTAAGATTTATTGCTAATGTGAAAACAAAAGAAACTATAGCATTAGTATACACGCTGTCTCACCGTCGAC
TCTCTCATAGATAAGATAGAACATACAAAGAAGATGAAATCAGTAACAAATATCGACATGGAACGATACAAACTCTACTGAAAAAA
AAATCGCAAGACAAGATTTAATATATTTTTTTTAATTTAGCAAGAAAAATAGAGAAACAACATTTTCAGAAGCCTTTGGCACCAGA
TTCTTTGACAACGGCAGGTTGATCAGCCATGGACAAGCAGTACTTAGCAATCTCTCTGAACTTAGGAACGCTTCTCAGGTCCACCT
TCGTCCCGTCTCTCAACGTGATGATGTCTCTTTCCGCCGCTGCAAAGTGTGGTGTTTCTGTGAGAAGGTTTGTAGCTGAGTGCGCT
TAAGCTGTAGATACAGACACGATCCTGCTTCGACTTGATAGATACTTCGTTGGCTGCTGTCTGAAAAACGGGGATGTTGCAGCGGA
CGTTGTTGTTGTTGTTGTCGGAGGAGGGTTTGAGCAGCTTGGCGCTGCACTGTCTTGAGAAAGTGTTGATTGCACAAGTGTCGCAG
TAGACAACTCCGACGACTGTGATGCGAGAAGAAGGGTCAGGGCTTCCTCCCGGTGGTGAAAGGCCACGACCACGGCCAAAAGCTTG
GTGTAACAAGCTAGGAGCTAGAAGGAGAAGACAGAGAAGAGGAAGATACATTGTGGCTAATCTCTTTTCACTGTCTCCCTATTCTC
TTTCTTGATGATAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873600 hypothetical protein ARALYDRAFT_488130 [Arabidopsis lyrata subsp. lyrata]2789e-023
NP_196818 Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]2752e-022
AAM62468 unknown [Arabidopsis thaliana]2752e-022
AAF43934 Contains similarity to Vip1 protein from Schizosaccharomyces pombe gb|Y13635.1 and contains a RNA recognition motif PF|00076. EST gb|AI996906 comes from this gene [Arabidopsis thaliana]2107e-015
NP_563947 NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana]2107e-015

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LEU2 Putative uncharacterized protein2751e-022
Q9FY96 Putative uncharacterized protein At5g131402751e-022
Q949S6 Putative uncharacterized protein2105e-015
Q9M9S8 F14L17.11 protein2105e-015
Q5MG95 Putative uncharacterized protein1901e-012

Arabidopsis top hits (Blast detail)Scoree value
AT5G13140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen and extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26960.1); Has 90 Blast hits to 85 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).2759e-025
AT1G14345.1 oxidoreductase2112e-017
AT3G26960.1 unknown protein1216e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information