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Information for unigene UN03485
| FASTA Sequence |
| Unigene ID: UN03485 | Length: 969 |
SSR | | AAGTAAAGTAAACGCTAGTTTAAACACAAAAGTAGGTCTTACAACATGAAGGAGACGACATAAGAAACACATAAAACCATACAAGT
AACAGGACAGGAAGACCGTGAATGACACTTAAACTGTGAACTCGACATCTTTTCATGTAAAAGGGGTCTTCGAGTCTCTAAATTTT
GTTAAACGCAACAATGTCGACACTTTGGATGTACTCATTGTTAGGCTCTGAGGTGAGATGGTCTTCAATGAGGTTGTCGACAGAGA
CGAGGTCACCATCAATTGTCATCATTATAGTGAGTTTCTTTATCCCGTAACCAACCGGTACCAGTTTTGAAGCTCCCCAATAGAGA
CCAGGCATCTGAACACTACGGACAGCTTCTTCCAACTTCTTCACATCGGTTTCATCATCCCATGGCTTTACATCAAGTAGCACAGA
TGACTTTCCACTCTCTTTAGGTTTCTTGGTATGTTTCTTAGCAGCTTCCCTCTCCTCTGCAGCCTTTTTCTCATCTTCTGTCTCGT
CAGCAAAAAGATCAATATCATCATCATCATCAGCAACAGCATCAGCTCTAGCAGCAGCAGGTGCCTCTGTTTTCGGAGTTCCGGAC
TGAGCAACACCGCCACCAATTTTCACTCCGACAGCTTTCCCGGGAAAACTTTTAGCAAGATGGGAAGCAACGGTGTCATACCACTT
GCTAACGTTTGGGAAACCATCACCTGGTTTCTCCAACACGGCAGCGTAAACCTTCACATCATCCACTGAAAGCTTATCGCCGGAGA
TGTAAGTTTTCCCCGAGAGGTGTTCTTCAACGGTTTTGAGACCTTGCTCTGTGTGGAGATTTGAAAACGTAATCGCCATCGATCCT
CAAATTATTATGCTGAAGCGGAAGTGACAGAGAGAATATGCCGCTTTAAAAAGACTGTTTGTGTGTGTGTAAAACTCTAGAAACTC
CTAAACCAGTCAGACCGGTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 1034 | 3e-110 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 988 | 6e-105 |
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 914 | 2e-096 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 911 | 5e-096 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 908 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84WM9 Elongation factor 1-beta 1 | 993 | 7e-107 |
| Q9SCX3 Elongation factor 1-beta 2 | 931 | 1e-099 |
| P29545 Elongation factor 1-beta | 800 | 2e-084 |
| Q40680 Elongation factor 1-delta 1 | 639 | 8e-066 |
| P48006 Elongation factor 1-delta 1 | 637 | 1e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 988 | 4e-105 |
| A9P7W8 Predicted protein | 799 | 4e-083 |
| B9GEM9 Predicted protein | 791 | 3e-082 |
| Q1XG58 Putative elongation factor | 753 | 8e-078 |
| B3TLP3 Translation elongation factor EF-1 beta chain | 746 | 5e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 994 | 5e-108 |
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 932 | 8e-101 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 642 | 3e-067 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 638 | 1e-066 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 631 | 6e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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