Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN03503

FASTA Sequence
Unigene ID: UN03503Length: 1379 SSR 
TTGGGGGAGTTTAGGTTTCTCTTCGAAGCTTCTGGAAGGATTGAGAGAGAGAGAGAGAGAGATCTCAGAGGAAAATGGCAGCTACA
AGTGAGAAACAGAACAACAACAGCTCAAAGCCTCCTCCTACTCCTTCTCCTCTCCGCAGTTCCAAGTTCTGTCAGCCTAACATGAG
GATCTTGATCTCGGGAGGAGCTGGCTTCATTGGCTCTCACTTGGTTGATAAGCTCATGGAAAATGAGAAGAACGAGGTGATTGTTG
CTGATAACTACTTCACTGGATCAAAGGAGAACCTCAAGAAGTGGATCGGTCACCCAAGATTTGAGCTCATTCGTCACGATGTTACC
GAGCCTTTGTTGATCGAGGTTGATCGGATCTACCACCTTGCTTGTCCTGCCTCTCCTATCTTCTACAAGTACAACCCCGTTAAGAC
CATCAAGACCAATGTGATTGGTACACTCAACATGCTCGGTCTCGCCAAGCGTGTTGGAGCTAGAATCCTGCTCACCTCGACCTCGG
AGGTCTACGGAGACCCTCTCATCCACCCTCAACCAGAGAGCTACTGGGGAAACGTCAACCCTATTGGTGTCCGGAGTTGCTACGAC
GAAGGCAAGCGTGTGGCTGAGACGTTGATGTTTGACTACCACAGACAGCATGGCATTGAAATCCGCATTGCTAGGATCTTCAACAC
GTATGGTCCTAGGATGAACATAGATGATGGGCGTGTGGTGAGCAACTTCATTGCTCAAGCACTTCGAGGTGAGGCTTTGACAGTTC
AGAAACCGGGGACGCAGACTCGCAGTTTCTGCTATGTGTCAGACATGGTGGATGGACTTATCCGTCTCATGGAAGGAGATGATACT
GGTCCTATCAACATCGGTAACCCAGGTGAGTTCACAATGGTGGAACTGGCTGAGACAGTTAAGGAGCTGATTAACCCGAGCATAGA
GATAAAGATGGTGGAGAACACACCGGACGATCCAAGACAGAGGAAACCAGACATAACCAAGGCTAAAGAAGTGTTGGGTTGGGAGC
CAAAGGTGAAGCTCAGAGAAGGACTTCCTCTCATGGAAGAAGACTTCCGGCTAAGGCTTAACGTCCCCAAGAATTAAAGAAATGTG
AAGGCACAGGAGAACAACGTTTTAAGAGTATATGGTGTTTCATTATATACTACAGAGTGATGGTTTGGTTTCATACTTTCATGTAT
TGTTATTGATCTTTCCTTCTATTCATAGAAAAATAAGTTGGGAAAGTTTTTTTTTTTTCTTTTCTTAATGAGGATCGACTCTTTTT
GTTTGAATATATTGCGGTATGGTTATCGTGTCATATTATAATGTTTCTTTCTATTTTTCCAATCCATGAAATCAATATATGTTTTA
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001078768 UDP-glucuronic acid decarboxylase 3 [Arabidopsis thaliana]17603e-194
XP_002866324 UDP-glucuronic acid decarboxylase [Arabidopsis lyrata subsp. lyrata]17551e-193
NP_200737 UDP-glucuronic acid decarboxylase 3 [Arabidopsis thaliana]17514e-193
AAK53026 AT5g59290/mnc17_180 [Arabidopsis thaliana]17442e-192
XP_002877483 UDP-xyl synthase 5 [Arabidopsis lyrata subsp. lyrata]17245e-190

Swiss-Prot top hits (Blast detail)Scoree value
Q8NBZ7 UDP-glucuronic acid decarboxylase 110522e-113
Q91XL3 UDP-glucuronic acid decarboxylase 110522e-113
Q5R885 UDP-glucuronic acid decarboxylase 110522e-113
Q5PQX0 UDP-glucuronic acid decarboxylase 110522e-113
Q6DF08 UDP-glucuronic acid decarboxylase 110413e-112

TrEMBL top hits (Blast detail)Scoree value
Q9FIE8 DTDP-glucose 4-6-dehydratase-like protein17512e-193
Q94JQ5 AT5g59290/mnc17_18017442e-192
Q9SN95 AT3G46440 protein17154e-189
B9SZF3 Dtdp-glucose 4-6-dehydratase, putative16634e-183
Q9ZV36 Putative nucleotide-sugar dehydratase16609e-183

Arabidopsis top hits (Blast detail)Scoree value
AT5G59290.2 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic17619e-197
AT5G59290.1 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic17521e-195
AT3G46440.1 UXS5; UDP-glucuronate decarboxylase/ catalytic17162e-191
AT3G46440.2 UXS5; UDP-glucuronate decarboxylase/ catalytic17162e-191
AT2G28760.2 NAD-dependent epimerase/dehydratase family protein16614e-185

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
2143  64%
 
1810  15%
 
205  7%
 
197  10%
 
92  3%

Unigene MembersMember information