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Information for unigene UN03550

FASTA Sequence
Unigene ID: UN03550Length: 1052 SSR 
GGGTAGAAAAAAAGTGAGAGAGAGAGAGAAAGCCCTAAAGACACCAAATAGTTTTTGGCAGTCGTATCGTCTTCTCCTTCTTCCTT
TGAACATCGGAGTTTTCACCGACGAATCGAACTGTTTTTCTATTTCTCTCTACGATTCAGGTTTTTCACTTGGATTCAGAACAGCA
AATTGTACTTTTGTTCTTATAGATAATTAGAAGACAAAGATGGATGATTGGGAGACTGAAGACTTTCAACCAACTCCTGCAAAAGT
CGAACTTAAAAGCAATTGGGATGATGAGGATGTTGAGGAGGATGTTGATGAGAATGACATCAAGGACTCTTGGGAGGAGGAGGATG
AGGAGGAGGAGGATGATGATGAACCTACTCCGGCAGCTGTAGTAAAGCCTGCTCCAAAGAAAGCTGTTGAAAAGAAGGGTAAATCT
GTTGAAGCTCCTCCAAGAGAACCATCAAAGGATGAACCTTTTGATCCTATTGCTGACAAACTTCGCATGCAGAGGCTAGTGGAGGA
AGCTGATTACGAGGCAACTGCTGAACTGTTTGGAGCAAAGACTGATGAAAAAGCCGTTGATGTTTTCATTCCCAAGTCCGAAAGCG
ATTTCTTGGAGTATGCTGAGATGATATCTCGTAAACTTGTACCTTATGAGAAAAGCTTTCACTATATTGGGCTACTCAAAGCAGTG
ATGAGACTTTCTGTGGCAAATATGAAAGCAGCTGATGTTAAAGACGTTGCTTCCTCTGTTTCGGCAATAGGTAACGAAAAACTCAA
GGCAGAGAAAGAAGCTGCTGCCGGCAAAAAGAAGACAGGTAAGAAGAAACAACTGCATGTGGATAAACCTGATGATGATCTTGTTT
CGGGTCCTTATGGCGCCATGGACGACGGTGATTTCATGTAACAGAAAAGGGCTTTTGGAGATTCACTTGCCTATGTAGGTTATTGG
AACTAAGAAGAGGTTTAAATCATAGGTTTTTCCTTTAATTATCTATTGAAGCAATACAAATTAGTTAAACAGAGTTGTCTTTTTCT
CAGTTTTTCATTTGCTTTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870534 hypothetical protein ARALYDRAFT_493723 [Arabidopsis lyrata subsp. lyrata]8597e-090
NP_850918 Translation initiation factor eIF3 subunit [Arabidopsis thaliana]8561e-089
NP_564865 Translation initiation factor eIF3 subunit [Arabidopsis thaliana]8005e-083
XP_002888479 hypothetical protein ARALYDRAFT_475711 [Arabidopsis lyrata subsp. lyrata]7728e-080
XP_002519577 Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]7021e-071

Swiss-Prot top hits (Blast detail)Scoree value
B4KTH6 Eukaryotic translation initiation factor 3 subunit J3046e-027
Q0VCU8 Eukaryotic translation initiation factor 3 subunit J2965e-026
B4IMQ8 Eukaryotic translation initiation factor 3 subunit J2922e-025
B4QHU5 Eukaryotic translation initiation factor 3 subunit J2922e-025
Q8I1G8 Eukaryotic translation initiation factor 3 subunit J2912e-025

TrEMBL top hits (Blast detail)Scoree value
Q8GRX2 Putative uncharacterized protein8561e-089
Q9C8D8 Putative uncharacterized protein At1g660708003e-083
B9S0Q8 Eukaryotic translation initiation factor 3 subunit, putative7027e-072
A9P9B6 Putative uncharacterized protein6444e-065
B9H3E9 Predicted protein6444e-065

Arabidopsis top hits (Blast detail)Scoree value
AT5G37475.1 translation initiation factor-related8852e-095
AT1G66070.1 translation initiation factor-related8181e-087

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
111  33%

Unigene MembersMember information