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Information for unigene UN03578
| FASTA Sequence |
| Unigene ID: UN03578 | Length: 1054 |
SSR | SNP | GGCAACAAAGGAAGTCGATATAAGAAAATGATAACACGTCTGATGGAAATGTGTTAAAGTAAGATTAATGTAAAGACAAAAGAGCA
AAGAGACACTACTACCAACTGAAAACATCTTCAAAACATGTCCATACTAATACAACACAAGAGCAGAGAGATACTGTTATCACCTT
AAAACATCATGCTCTATCTCTACTTGCAAAACAAATATTAGAAGAGGCTTTCGTAACTAAGGAAGGACCTGACTCTGCTTGATAAA
AAAAAAAAAATACGGAAGGGAATGTTTTTGATGTTGCCCCAGAATTTAAAACCCCAAAACCAAGACCTTTGTTCCTTAATTTAAAG
ACAACTATTCGTTAAGGAACAAACCGTTGAGAAGCTCGGTGGATGAACTCTCGTTTCCGTTTTCATCAAAGAAGCCATTTTCTGCG
CTTTCTTTCCTCAGCTTCCGCTCTTCAACGATGGATTCTTCTGTACCAGCACAGAAATTCCGTCTTCCTTGCCTAGCTGGTTTATC
AGCCACTATGAATTTGCTTCCATCTCGGACACGTTCAGAAAATCCCGCCCAAACTCCAAAATGATGCAAGACAATAGAAGCTGCAA
CAGTAACATTGAGAGAGGCAGTGCCACAGCCATACTGAGGAATGTAAACAAAGAAGTCACATATCTCATACTCTTTGGCAGATAAC
CCTGATCCCTCATTACCCAGAAGAAAAGCAGTGTTTCTTTTGAAAGGATGTTCATTGACCTGAGCAGCTCCATCTGCGATCTCAAC
GCCGCATATATCGCATTCTTTCTCCTCCTTGAGGTAGTCGCGAGCTTCGATTAAAGAGTGAAAGTGTCGGAAACGGACGTGAGAAG
CGGAACCATGGCTTCCGAAGGCGTTGAAGTCACGGCGGCCCACGAGTATCAGCTCCGTCACGCCGAACGCCGTCGCGCTTCGAGCT
AGTGTTCCCACGTTGTGTCGCTTCGCTATGTTGTGAACAACCACGTAGCTCTCATACTCCACCATCCCTCTTCCTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193287 tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] | 1078 | 3e-115 |
| CAB45991 OBP33pep like protein [Arabidopsis thaliana] | 1078 | 3e-115 |
| XP_002870233 tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 1074 | 8e-115 |
| AAA79704 OBP33pep [Arabidopsis thaliana] | 998 | 5e-106 |
| XP_002516828 rRNA methylase, putative [Ricinus communis] | 908 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA | 144 | 2e-008 |
| Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GYT1 OBP33pep like protein | 1078 | 2e-115 |
| Q9SUL3 OBP33pep like protein | 1078 | 2e-115 |
| Q38889 OBP33pep (Fragment) | 998 | 3e-106 |
| B9RSV9 rRNA methylase, putative | 908 | 9e-096 |
| A5AVL9 Putative uncharacterized protein | 884 | 6e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein | 1079 | 8e-118 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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