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Information for unigene UN03585

FASTA Sequence
Unigene ID: UN03585Length: 1318 SSR 
TTTGTGCTCCAAAGACATATATTGATCAGGTGGTACTTTGAATTCAACAATGATAGTCTCTACTAACAACTCAAAGATGGTTTCTT
CTGGAGATGTTAAACCCCCATGATCTGCCTTTGGAGCAAGATGATGTCTCTCAGTTCTTGATCCAGGGAAAGCCTAGAATTTACTT
CAACCTACTTGAGGTAAAATATCTCGAGCAGAGCTTTAATTGCAAGTAGGCCAGTCATCGGATCTTCTCTCTTAAGAGCTAAGCAA
TAGCACCATCTCTCTCTCTCTCTCTCTTGAATAAGCTCCTCTGCTCTGTTTTTTTTCTTTCTATCTACTCTCTCTCTCTCTGTCTC
TTTTATTCAGTGGACTTCTGAAACGAAACAAAAAATGGCATCTTCTTCTTCTAGATCCCAATCTGAGTTCTGTCCTCTCTCGTCGT
GTCCCTCTATCGAACGGATTAAAGACGCATGTCGTTTCCTCGTCTCCGCTGTTCTTGGCACAATTCTCTCGGCGATCTTGACCTTC
TTCTTCGCTCTAGTGGGAACATTGCTTGGAGCAGTCACAGGAGCTTTGATAGGCCAAGAAACAGAGAGTGGCTTCATCCGAGGAGC
TGCGGTTGGAGCCATCTCAGGAGCTGTTTTCTCCATCGAAGTCTTTGAGTCCTCTCTTGTTCTCTGGAAATCTAACGAGTCACGCT
TCGGTTGCCTCCTCTACTTGATTGATGTCATTGTTAGTCTTATAAGTGGTAGACTTGTACGGGAACGCATAGGTCCAGCAATGCTA
AGTGCAGTTCAAAGTCAGATGGGAGCTGTGGATGCAACTTTCGATGAGCTCTCGAGTATCTTTGACACGGGTGGCTCAAAAGGATT
AACAAGAGATACGGTTGATCAAATACCCAAAATCAAAATCACAGGCAGAAACAACTTAGATGCTTCCGGCGACGAATACTCTTGTT
CTGTTTGTCTTCAGGATTTTCAGCTTGGTGAAACGGTAAGAAGCTTGCCGCAATGTCATCACATGTTTCACTTACCTTGCATAGAC
AATTGGCTCCTCAGACACGGATCTTGTCCTATGTGTAGACGTGATCTCTAATCTCCTCTCCCTTTCTTACCCATTTGCACAGTCTC
CATCTCTCTCCTTTTCTTATATGTATGGTCATAATCTTGTGGTTAGTCTCTCTCTATATGTACAAAGAAAAAAAAAGTTTTGTTGA
TCTTGAAAGCCAGAAAAACTCAACCAAATCCATTTAATAGATTGTGTGTTGGTCTCACCAATTTTAAAGTGGTTGATGTTTTCGCA
ATATTCTTTAAGTTATGACGTGAATTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195309 NEP1-interacting protein 1 [Arabidopsis thaliana]10821e-115
XP_002869057 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]10812e-115
CAC81897 NEP1-interacting protein [Arabidopsis thaliana]10596e-113
XP_002884081 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]10068e-107
NP_179364 NEP1-interacting protein 2 [Arabidopsis thaliana]9871e-104

Swiss-Prot top hits (Blast detail)Scoree value
Q8GT75 RING-H2 finger protein ATL4M10825e-117
Q8GT74 RING-H2 finger protein ATL2B9876e-106
Q9FKX5 RING-H2 finger protein ATL5P8155e-086
Q8LBA0 RING-H2 finger protein ATL1Q3909e-037
Q9SRQ8 RING-H2 finger protein ATL3A1873e-013

TrEMBL top hits (Blast detail)Scoree value
B9SXB2 RING-H2 finger protein ATL4M, putative9162e-096
B9MXB1 Predicted protein9053e-095
C6SY09 Putative uncharacterized protein8874e-093
B9N918 Predicted protein8812e-092
A8E124 NEP1-interacting protein8524e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G35840.1 zinc finger (C3HC4-type RING finger) family protein10834e-118
AT2G17730.1 zinc finger (C3HC4-type RING finger) family protein9884e-107
AT5G66070.1 zinc finger (C3HC4-type RING finger) family protein8163e-087
AT5G66070.2 zinc finger (C3HC4-type RING finger) family protein4803e-048
AT1G74410.1 zinc finger (C3HC4-type RING finger) family protein3908e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  11%
 
181  11%
 
116  67%
 
201  11%

Unigene MembersMember information