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Information for unigene UN03606

FASTA Sequence
Unigene ID: UN03606Length: 728 SSR 
ACTTTTCTTTTCACTTTCCCGCTCTCGTTTTCAAGCTGTTTATTTATTCTCTCTCTCTTCGATTTAGGGTTCGTTTAGATTCATTA
CCAAACGCTTCGGATCTTGTTCTCTTAACGGTTTAAGAGGAGATATGGCAGGTAAAGGCGGCAAGGGGCTTATCGCTACAAAGACA
ACTACGTCTGCTGCTGCTAACAAAGACAAGAAGAAATCCATCTCTCGCTCTTCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTAT
CCATCGTCAACTCAAGGCACGTGTTTCAGCACACGGGAGAGTTGGCGCCACCGCTGCAGTCTACGCGGCATCGATTCTCGAGTACT
TGACTGCGGAAGTTCTCGAGTTAGCTGGGAACGCGAGCAAAGATCTGAAGGTGAAGAGGATCACTCCGAGGCATCTGCAGCTTGCG
ATCAGAGGAGATGAGGAGCTCGACACTCTCATCAAAGGAACAATCGCTGGAGGTGGTGTCATCCCCCACATCCACAAGTCTCTCAT
CAACAAAACCACTAATGAGTGAAGTGATGAGCTTCATCTCTAGATTTATGTGCTTTTGCTTTGTGTTTTTTAGCTTATTTGTTTTA
GTCTGCTCTCTCTCTCTCCTGGACCATCCTCAAGTGTATATGGGCTAAATCTTAACCTCGTAGGTTTCTCTCGTTTTTAGACTCCA
TTCTCTTGATCTTTCTAATGGCTACTAAGTACTATGATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181415 histone H2A 8 [Arabidopsis thaliana]6013e-060
XP_002881618 hypothetical protein ARALYDRAFT_482894 [Arabidopsis lyrata subsp. lyrata]6013e-060
XP_002300810 histone 2 [Populus trichocarpa]5951e-059
XP_002307619 histone 2 [Populus trichocarpa]5932e-059
NP_191019 histone H2A [Arabidopsis thaliana]5914e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9SII0 Probable histone H2A variant 26011e-061
O23628 Histone H2A variant 15912e-060
Q8H7Y8 Probable histone H2A variant 15876e-060
Q8S857 Probable histone H2A variant 25786e-059
Q84MP7 Probable histone H2A variant 35697e-058

TrEMBL top hits (Blast detail)Scoree value
Q0WRN0 Histone H2A6012e-060
A9P990 Histone H2A5951e-059
A9PG14 Histone H2A5932e-059
Q0WS87 Histone H2A5913e-059
A2XCU2 Histone H2A5878e-059

Arabidopsis top hits (Blast detail)Scoree value
AT2G38810.1 HTA8 (HISTONE H2A 8); DNA binding6021e-062
AT2G38810.3 HTA8 (HISTONE H2A 8); DNA binding6021e-062
AT2G38810.2 HTA8 (HISTONE H2A 8); DNA binding6021e-062
AT3G54560.1 HTA11; DNA binding5921e-061
AT1G52740.1 HTA9 (HISTONE H2A PROTEIN 9); DNA binding5347e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
111  50%

Unigene MembersMember information