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Information for unigene UN03610
| FASTA Sequence |
| Unigene ID: UN03610 | Length: 989 |
SSR | | AGAGAGAGAGAAAGAAAAGGTCTAGAGCTGATAAAAACAAGCCACAGAAGAAGGAAGAGGAAGAAAGGAGGGACTGATCTGCCATT
AATGCCACCACTCAACGGGAACACCTTTCTCACTCTCTCTTGGTTGAGAATTGAGACTTGAGAACTTAAAAAAAGATTTGCATAAA
AAGGTTCTCCATCTCTATATCTCTCTCTCTCTCTCTCTGAATCACTCAATCATGGGGATTTGCTTGAGTGCCCAGGTCAAAGCTGA
GAGTCCAGGGGCAAGTCCCAAAGATACTAGAAGTCTTGGGAGGAAGGGTTCATCTGTTTCTGTAAGACCAAGCCCTAGAACTGAAG
GCGAGATCTTACAGTCTCCAAACCTCAAGAGTTTCAGCTTTTCAGAGCTTAAATCAGCAACCAGGAATTTCAGACCAGATAGTGTG
CTTGGTGAAGGTGGATTCGGTTGTGTTTTCAAAGGATGGATTGATGAGAAATCTCTCGCTGCCACAAGACCGGGCACTGGTTTGGT
TATTGCTGTCAAAAAACTTAACCAAGATGGTTGGCAAGGTCACCAGGAGTGGCTGGCTGAAGTGAACTATCTTGGTCAGTTTTCTC
ATGGACACCTTGTGAAGCTGATTGGTTATTGTCAAGAGGATGAGCACCGTCTTCTTGTTTACGAGTTCATGCCTCGTGGTAGCTTG
GAGAATCATCTTTTCAGGAGAGGTTTGTATTTCCAGCCTTTATCTTGGAAACTACGGTTGAAAGTTGCTCTTGGCGCTGTAAGGGG
ACTTGCTTTTCTCCACAGTTCCGAGACAAGAGTGATATACCGTGACTTCAAGACTTCTAACATCCTTCTTGATTCGGACTACAACG
CTAAGCTTTCTGATTTTGGGTTGGCTAAGATGGGCCAGTGGGTGATAAAAGTCATGTCTCTACACGGGTCATTGGTACTCACGGAT
ATGCAGCTCCTGAATACCTCGCAACCGGTCATCTAACAACAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892407 hypothetical protein ARALYDRAFT_470784 [Arabidopsis lyrata subsp. lyrata] | 1089 | 1e-116 |
| NP_172237 protein kinase APK1A [Arabidopsis thaliana] | 1071 | 2e-114 |
| AAF79545 F22G5.5 [Arabidopsis thaliana] | 1071 | 2e-114 |
| NP_001184929 protein kinase APK1A [Arabidopsis thaliana] | 1028 | 1e-109 |
| NP_001031439 protein kinase APK1B [Arabidopsis thaliana] | 998 | 5e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q06548 Protein kinase APK1A, chloroplastic | 1071 | 7e-116 |
| P46573 Protein kinase APK1B, chloroplastic | 998 | 2e-107 |
| P43293 Probable serine/threonine-protein kinase NAK | 837 | 9e-089 |
| O48814 Serine/threonine-protein kinase BIK1 | 807 | 3e-085 |
| O49840 Protein kinase 2B, chloroplastic | 765 | 2e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7GAG3 Putative uncharacterized protein At2g28930 | 998 | 3e-106 |
| Q2V447 Putative uncharacterized protein At2g28930.3 | 944 | 6e-100 |
| Q2V448 At2g28930 | 942 | 1e-099 |
| B5L8D2 Protein kinase 1b | 933 | 1e-098 |
| Q8GWX0 Putative uncharacterized protein At2g28930 | 932 | 1e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G07570.2 APK1A; kinase/ protein serine/threonine kinase | 1071 | 6e-117 |
| AT1G07570.1 APK1A; kinase/ protein serine/threonine kinase | 1071 | 6e-117 |
| AT2G28930.2 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 998 | 2e-108 |
| AT2G28930.3 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 944 | 3e-102 |
| AT2G28930.1 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 942 | 6e-102 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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