RadishBase

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Information for unigene UN03646

FASTA Sequence

Unigene ID: UN03646	Length: 1197	SSR
GCTACTCCAGCTCCAGCTCCAGCTCCAGCTCCAGCTCCCACTACCACAACGATGGGACCCCTCGGAGGTAACAAGGGAGACACATT TGACGATGGTATTTTGGACGGCGTGAAGAAAATAACCATCGCCGCAGATGAATACAGCATAACTTATATCAAGATCGAATATGAAA AAAATGGGAAAGCTGAAGTCCGTGAACACGGGACGAACCGTGGAGAGCTAAAAGAGTTTTCCGTGCCTTATCCGGCTGAGTACATC ACGGCCGTTGGTGGAAGCTACAAGCATATTTTCAGCTATGATACAACGCTTATTACATCGATATACTTCACAACCTCCAAAGGATT TACGTCTCCATTGTTCGGTGAGATGAAGGGAACAGAATTCGAGTTCAAAGGCGAAAATGGTGGAAAGCTTGTTGGATTCCATGGAC GTGGTGGCTATGCTATTGATGCCATCGGTGCACATTTTGCTGTATCTACAACCTCTTCTCCATCTTCTCTCATCAAAGTGGAAGCT GTAGGAGGAAAGGGTGAAGATACATTCGATGATGGTGGTGCTTTTGATCATGTAAGAAAAGTTTTTGTTGGTCAAGGCAATTCCGG TGTGGCTTATATCAAGTTTGAATACGAGAAAGACGGTAGAAGAGTGACACACGAGCACGGAAAAGAGACATCCCTAGGAACAGAGG AGTTCGAGGTTGGTCAAGGCGACGACATCACATCTGTGAAAGTTTACTACGATAAACTCTTTGGCTCGAAGACAGAGATAATAACG TCTCTTACGTTCAAGACACTGAAGGGCATCACCTCTCAGCCGTTTGGAATGACCTCAGAGAATTTTTCCTTGCTCGAAGGTGGCAA AATCACCGGTTTTCATGGAAGTTCGACGGACGTTCTTCATTCTCTCGGAGCTTATACAGTGGCTTGTGTCGGGAGCTTATAAGCTA TGATGCACGGGGACGGCATATCCTTGACGTCTCCTGTTCCGTGTTTGGTGGGTTTGTGAGTTTTAAGAGGTCATTTGCTTGTGTGT TTTAGAAATGTCTACATTTTATGTGTGTTTGGTCTTTATGAAATAAATCCAATCAATAAGAGTATAACTGGGTTTTCAAGTAATGT ATGTGTTCTACATTTTCCGTGTGTTTGGTCTTTATGAAATAAATCCAATCAATAAGATTATAACTGGGTTTTCAAATAA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_566547 myrosinase-binding-like protein [Arabidopsis thaliana]	705	6e-072
XP_002885141 hypothetical protein ARALYDRAFT_479107 [Arabidopsis lyrata subsp. lyrata]	702	1e-071
AAC08050 myrosinase-binding protein [Brassica napus]	686	9e-070
BAA22099 unnamed protein product [Arabidopsis thaliana]	640	2e-064
AAC08048 myrosinase-binding protein [Brassica napus]	583	8e-058

Swiss-Prot top hits (Blast detail)	Score	e value
O04309 Myrosinase-binding protein-like At3g16470	705	2e-073
Q9SAV0 Myrosinase-binding protein-like At1g52040	678	3e-070
Q9SAV1 Myrosinase-binding protein-like At1g52030	672	2e-069
O80948 Myrosinase-binding protein-like At2g39330	578	1e-058
O80950 Myrosinase-binding protein-like At2g39310	569	1e-057

TrEMBL top hits (Blast detail)	Score	e value
Q96342 Myrosinase-binding protein (Fragment)	686	6e-070
Q9M5W9 Myrosinase-binding protein-like protein	642	8e-065
O65187 Myrosinase-binding protein homolog	624	1e-062
Q94AD4 At1g52040/F5F19_10	619	4e-062
Q9ZU23 F5F19.6 protein	589	1e-058

Arabidopsis top hits (Blast detail)	Score	e value
AT3G16470.1 JR1	705	2e-074
AT3G16470.2 JR1	705	2e-074
AT1G52040.1 MBP1 (MYROSINASE-BINDING PROTEIN 1); protein binding	678	3e-071
AT1G52030.2 MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding	631	8e-066
AT1G52030.1 MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding	631	8e-066

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	3			50%


10	1			17%


8	2			33%

Unigene Members	Member information