Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN03649

FASTA Sequence
Unigene ID: UN03649Length: 791 SSR 
GGCTGGACAGCATCAACAAACCACAAAGAGAGAGAGAGAGAGAAAAAAAATATTTCGAAAGAGAACCTCAAAGAAGCTAATTATTT
ACAGTTTCGTCGCTAAGTTTACATATCTAAGCATTTCAACACCGCCATGTGTGGAGGAGCAATAATCTCCGATTTCATCCCACCGC
CGAGGTCCCGCCGCGTCACGAGCGAGTTCATCTGGCCGGATCTGAAAAACAAAGGGAAAGCTTCGAAGAAGAAGCGATCCGATTTC
CTCGATCTGGAGGATGAGTTCGAGGCTGACTTTCAAGGGTTTAAGGATGATTCATCTTTCGACTGCGAAGAAGAAGATGAATTCGA
CGTCGATGATGATGATGTCTTCGCCGATGTTAAGCCCTTTGTTTTCACCGCAGGTACCAAGCCAGCAGCTTCCCCTCCCACCACTG
GTCCAGTTTCTGGCGTAGAGTCTGGTGGGCAAGCTGAGAAATCTGCTAAGAGAAAGAGGAAGAATCAGTACCGAGGGATAAGGCAG
CGCCCTTGGGGCGAATGGGCCGCTGAGATCCGTGATCCTAGAAAAGGCGCTAGAGAATGGCTTGGAACATTCGACACCGCCGAGGA
AGCAGCTAGAGCTTATGATGCAGCTGCACGCAGATCCGTGGTAATAAAGCTAAGTGAATTTCCCTGAGGAGTTGGTCCCTAGCAAA
CGCCCTGCTGCCAGACAGCAATCTTAAGAAGCAGTGGCTACACTTTGGTCAGCAGCCACACATGTGATCAGTACTGCACACTCCTT
TAGTGACGTGAGTTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33606 unnamed protein product [Thellungiella halophila]6929e-071
NP_850583 ethylene-responsive transcription factor RAP2-2 [Arabidopsis thaliana]6802e-069
NP_850582 ethylene-responsive transcription factor RAP2-2 [Arabidopsis thaliana]6793e-069
XP_002885024 hypothetical protein ARALYDRAFT_897690 [Arabidopsis lyrata subsp. lyrata]6767e-069
BAJ34297 unnamed protein product [Thellungiella halophila]6533e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSA8 Ethylene-responsive transcription factor RAP2-126307e-065
Q9LUM4 Ethylene-responsive transcription factor RAP2-26021e-061
Q6K7E6 Ethylene-responsive transcription factor 13709e-035
O22259 Ethylene-responsive transcription factor ERF0712391e-019
P42736 Ethylene-responsive transcription factor RAP2-32391e-019

TrEMBL top hits (Blast detail)Scoree value
A8MRL7 Uncharacterized protein At3g14230.36802e-069
B9DG10 AT1G53910 protein6301e-063
A8MRC0 Uncharacterized protein At1g53910.36192e-062
Q3KZ43 Putative ethylene responsive element binding protein5341e-052
Q3L0R1 Ethylene-responsive element binding protein ERF25287e-052

Arabidopsis top hits (Blast detail)Scoree value
AT3G14230.3 RAP2.2; DNA binding / transcription factor6801e-071
AT3G14230.2 RAP2.2; DNA binding / transcription factor6791e-071
AT1G53910.1 RAP2.12; DNA binding / transcription factor6306e-066
AT1G53910.2 RAP2.12; DNA binding / transcription factor6306e-066
AT1G53910.3 RAP2.12; DNA binding / transcription factor6191e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information