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Information for unigene UN03734
FASTA Sequence |
Unigene ID: UN03734 | Length: 1726 |
SSR | | GTCTTAAAATATTATAAATGAAAGAAAATCTCCAACAAGCTGAGTAAATCACAAACACTATTTTAATTTTTATTTTATTGATGACA
ATAAATTAATGCGTTTAGTGATCTCGAACTAATAAAGTTTCTATATCATATTGTCATTTAACATATATATATATATATATATATAG
CTTTCAGAAAACAAGAATTGTCTCATTCTCGGTTGTAGAATCCTTCACACCAGAAGAAGACTCAACTCTGCCTGTCGCTTTCCTTA
CCTCTTCATCCCAATTTGTAAGAAAGGTGATGATGGAAAGACATACACCTTGAACGATGAGTGCACATATGATTCCCAGCCAAAGC
CCCCGACCACCCAAGTGAAAGTGAAAACCAAGTAACAATCCCACAGGAATTCCTACAAGATATATGATCCAGATCACACAGCTCCT
ATCTCTGCCATCCACATCCTCTAGCAACCCTGAAAGAACACTTTGTAAGCTGTCTAGGCAATGGCTAAGGCGAGAATCGGCAACAT
CGAGGCTACAAAGTTGACTACTTCTGGGTCACTACTGTATGCGAATCCCCATATCTTCCTTATCAGTATCAATACCGAACCAACTA
TTATGCTCTCTAAGATTGCGATGCTTATGACCACACGAACCGCAAGCTTAGCCACTTTTGGATTCCCTGCTCCTAACTCATTTGAC
ACCCTTGTGCTTGCCGCGCCGCTGAGGCCAAATGGGATCATCCAGATTGTTCCTGATGTATTAAGGCAGATTGATAGAGAAGAAGT
TTCTAAAACAGGGTTAGGAAGAAGTCCGGACGAGAGTACCAAAAATTCAAAGGACCACATCTCTAGGCAGACCATAAGTGCAGAAG
GAATAGCAAGCTTCATAAAAGGGATGATATCGCGTAGAGCCTCCTTAGAGAAACCAGTCCAGGTCATTGAGCAAGAAGGCGAATAC
CTGACGTAACATGACAATAGGATGACAGCAAGCCAATACGAGATCGCATTCGCCACAGCAGCTCCTCTAAACCCTAAACCAGATTT
CAACACCAAGGTCCAACATAGGATAACATGAAGACAAGTGGTGACTCCAGAACACAAAACCACAGGAAACACATTGTTTTGTGCCT
GCAAAAACCTGTTGAGACACTGAAGAAGACCGTAGGCGAAGATGCTAGGGATCATGAACTTGGCGTAGGAGCCAGAGAGGTGTGCA
ATGGCTTTGTCTTGTCCAAAGAAGACGAGGAAGTGTTCTGTGTTGGCCCAAATGATGGAGAGAGGAACAGAGTAGAGTGTAAGAAC
AAGCATTGCTCTTTGCATTTGTATGCCTAGCATTTCGTACATCTTGGCTCCGTAGGATTGGCCACAAACTGTGTCCAACGCACTTG
CTGTTCCCATGAGGAAGGTGAAGCATGTGACTGAGGCGAAGGAGGTGGCAACAGCGGCGGCCGAGAGGGGAAGAGAGCCAAGATGT
CCTACGAACATAACTGAGATTACTTGCAGACAAAACTGAAGAAGACTCACTGCTATTAGTGGTCCAGCAAGCCATAGCTGCTTCTT
CACTTCCTCCTTTATTCCACTATTTTCCTGCTCAATGAGAGGCCACAACAACACATCTTCTCTCTCCTTCATTATCGCTTTGCTGC
AAAGAATATTGTGTAGACTCGAGAGAAAAATAACAAACTCTTTGATCCCTGTCTTTTGGCGGTTCGTGCTTTTTTCAGTGTCTCTC
AGCTCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002879493 mate efflux family protein [Arabidopsis lyrata subsp. lyrata] | 1667 | 3e-183 |
XP_002865913 hypothetical protein ARALYDRAFT_918292 [Arabidopsis lyrata subsp. lyrata] | 1614 | 4e-177 |
NP_200058 mate efflux domain-containing protein [Arabidopsis thaliana] | 1607 | 2e-176 |
AAC27412 hypothetical protein [Arabidopsis thaliana] | 1607 | 2e-176 |
NP_180983 MATE efflux family protein [Arabidopsis thaliana] | 1607 | 2e-176 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LYT3 Protein TRANSPARENT TESTA 12 | 687 | 5e-071 |
Q9USK3 Uncharacterized transporter C4B3.13 | 603 | 3e-061 |
Q9UT92 Uncharacterized transporter C323.07c | 582 | 7e-059 |
Q96FL8 Multidrug and toxin extrusion protein 1 | 531 | 6e-053 |
A7KAU3 Multidrug and toxin extrusion protein 2 | 529 | 1e-052 |
TrEMBL top hits (Blast detail) | Score | e value |
O80785 Putative uncharacterized protein At2g34360 | 1607 | 2e-176 |
Q9FHB6 Genomic DNA, chromosome 5, TAC clone:K24M7 | 1607 | 2e-176 |
Q9C9U1 Putative integral membrane protein; 47574-45498 | 1377 | 8e-150 |
Q8LF49 Putative integral membrane protein | 1373 | 2e-149 |
B9T1V9 TRANSPARENT TESTA 12 protein, putative | 1194 | 1e-128 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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