 |
Information for unigene UN03734
| FASTA Sequence |
| Unigene ID: UN03734 | Length: 1726 |
SSR | | GTCTTAAAATATTATAAATGAAAGAAAATCTCCAACAAGCTGAGTAAATCACAAACACTATTTTAATTTTTATTTTATTGATGACA
ATAAATTAATGCGTTTAGTGATCTCGAACTAATAAAGTTTCTATATCATATTGTCATTTAACATATATATATATATATATATATAG
CTTTCAGAAAACAAGAATTGTCTCATTCTCGGTTGTAGAATCCTTCACACCAGAAGAAGACTCAACTCTGCCTGTCGCTTTCCTTA
CCTCTTCATCCCAATTTGTAAGAAAGGTGATGATGGAAAGACATACACCTTGAACGATGAGTGCACATATGATTCCCAGCCAAAGC
CCCCGACCACCCAAGTGAAAGTGAAAACCAAGTAACAATCCCACAGGAATTCCTACAAGATATATGATCCAGATCACACAGCTCCT
ATCTCTGCCATCCACATCCTCTAGCAACCCTGAAAGAACACTTTGTAAGCTGTCTAGGCAATGGCTAAGGCGAGAATCGGCAACAT
CGAGGCTACAAAGTTGACTACTTCTGGGTCACTACTGTATGCGAATCCCCATATCTTCCTTATCAGTATCAATACCGAACCAACTA
TTATGCTCTCTAAGATTGCGATGCTTATGACCACACGAACCGCAAGCTTAGCCACTTTTGGATTCCCTGCTCCTAACTCATTTGAC
ACCCTTGTGCTTGCCGCGCCGCTGAGGCCAAATGGGATCATCCAGATTGTTCCTGATGTATTAAGGCAGATTGATAGAGAAGAAGT
TTCTAAAACAGGGTTAGGAAGAAGTCCGGACGAGAGTACCAAAAATTCAAAGGACCACATCTCTAGGCAGACCATAAGTGCAGAAG
GAATAGCAAGCTTCATAAAAGGGATGATATCGCGTAGAGCCTCCTTAGAGAAACCAGTCCAGGTCATTGAGCAAGAAGGCGAATAC
CTGACGTAACATGACAATAGGATGACAGCAAGCCAATACGAGATCGCATTCGCCACAGCAGCTCCTCTAAACCCTAAACCAGATTT
CAACACCAAGGTCCAACATAGGATAACATGAAGACAAGTGGTGACTCCAGAACACAAAACCACAGGAAACACATTGTTTTGTGCCT
GCAAAAACCTGTTGAGACACTGAAGAAGACCGTAGGCGAAGATGCTAGGGATCATGAACTTGGCGTAGGAGCCAGAGAGGTGTGCA
ATGGCTTTGTCTTGTCCAAAGAAGACGAGGAAGTGTTCTGTGTTGGCCCAAATGATGGAGAGAGGAACAGAGTAGAGTGTAAGAAC
AAGCATTGCTCTTTGCATTTGTATGCCTAGCATTTCGTACATCTTGGCTCCGTAGGATTGGCCACAAACTGTGTCCAACGCACTTG
CTGTTCCCATGAGGAAGGTGAAGCATGTGACTGAGGCGAAGGAGGTGGCAACAGCGGCGGCCGAGAGGGGAAGAGAGCCAAGATGT
CCTACGAACATAACTGAGATTACTTGCAGACAAAACTGAAGAAGACTCACTGCTATTAGTGGTCCAGCAAGCCATAGCTGCTTCTT
CACTTCCTCCTTTATTCCACTATTTTCCTGCTCAATGAGAGGCCACAACAACACATCTTCTCTCTCCTTCATTATCGCTTTGCTGC
AAAGAATATTGTGTAGACTCGAGAGAAAAATAACAAACTCTTTGATCCCTGTCTTTTGGCGGTTCGTGCTTTTTTCAGTGTCTCTC
AGCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879493 mate efflux family protein [Arabidopsis lyrata subsp. lyrata] | 1667 | 3e-183 |
| XP_002865913 hypothetical protein ARALYDRAFT_918292 [Arabidopsis lyrata subsp. lyrata] | 1614 | 4e-177 |
| NP_200058 mate efflux domain-containing protein [Arabidopsis thaliana] | 1607 | 2e-176 |
| AAC27412 hypothetical protein [Arabidopsis thaliana] | 1607 | 2e-176 |
| NP_180983 MATE efflux family protein [Arabidopsis thaliana] | 1607 | 2e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYT3 Protein TRANSPARENT TESTA 12 | 687 | 5e-071 |
| Q9USK3 Uncharacterized transporter C4B3.13 | 603 | 3e-061 |
| Q9UT92 Uncharacterized transporter C323.07c | 582 | 7e-059 |
| Q96FL8 Multidrug and toxin extrusion protein 1 | 531 | 6e-053 |
| A7KAU3 Multidrug and toxin extrusion protein 2 | 529 | 1e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80785 Putative uncharacterized protein At2g34360 | 1607 | 2e-176 |
| Q9FHB6 Genomic DNA, chromosome 5, TAC clone:K24M7 | 1607 | 2e-176 |
| Q9C9U1 Putative integral membrane protein; 47574-45498 | 1377 | 8e-150 |
| Q8LF49 Putative integral membrane protein | 1373 | 2e-149 |
| B9T1V9 TRANSPARENT TESTA 12 protein, putative | 1194 | 1e-128 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
