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Information for unigene UN03735
| FASTA Sequence |
| Unigene ID: UN03735 | Length: 820 |
SSR | | AAAATCTTTCTTTTAGCATTCGATGATTACAAAACATATAGTAGTAGTTTTCATAACCCAACAAGTTCTTCCGTCTGTGAGCCAAC
ATAATCCAAAGCCCCTTCTTGTTCTTTATCACACAACACAGTTTCTTTTGCACCATCAATATCATCATCTTCTTCTTCATAGTCAC
CCTCATCTTCATCCTCATCCTCATCCTCATCACTACTAGTGATATAATTGTCTTCATCATCATCATCATCAGTTCGGTAGACTCCA
GCAAGGCTCGCTGTCTTCTCATCTACGAGACCAGTAACTTCCTTAGCTTCTTCCAGCTCATCTTGAGTCGAAGCCAACGACAAGAG
CACATTCTTAGCTTTCTGATCAGGTGGCACTCCACAGCCCTCCATCTCCTTGTACCAACTAAGAGCGCTCCCGAAATCCTTGCACC
TCCCAGACGCATCCATGATAGTGGTCAAAATCGTCTGATTCGCTTTGATGCCACTTAACCTCATTTTCTCGTATACCTCCATAACC
TTATCAAGATCGTTTGCTTTCGCATAACCTTTTATCATCGTCCCATAGGTTACTATATTCGGTTCAAAACCATCCACTTTTATCCT
CTTGAAGAATTTCTCAGCACCCTCCATGTCTGAAGCATTGACATAGGATGATAACATTGTTGTGTAAGAGCATAGATCCGGATAAA
ATCTGTCTCGTCGCATGCTTTTAAACACGGTCTTTGCTTGCTCCACCATTCCAGAAATAGCAAATGCATCAAGCAAAATGTTATAA
GCTTTATGCGTCGGCCTTACACCAGCATCAAGCATCTCTTCAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878256 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 945 | 5e-100 |
| NP_191463 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 930 | 3e-098 |
| NP_974457 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 930 | 3e-098 |
| CAB86932 putative protein [Arabidopsis thaliana] | 930 | 3e-098 |
| XP_002298285 predicted protein [Populus trichocarpa] | 798 | 5e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYT2 Pentatricopeptide repeat-containing protein At3g59040 | 930 | 1e-099 |
| Q9ZUU3 Pentatricopeptide repeat-containing protein At2g37230 | 226 | 5e-018 |
| Q9LR67 Pentatricopeptide repeat-containing protein At1g03560, mitochondrial | 224 | 8e-018 |
| Q0WMY5 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic | 221 | 2e-017 |
| Q9LQ16 Pentatricopeptide repeat-containing protein At1g62910 | 216 | 7e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EAH8 Putative uncharacterized protein At3g59040.2 | 930 | 2e-098 |
| B9GI17 Predicted protein | 798 | 3e-083 |
| B9T2X9 Pentatricopeptide repeat-containing protein, putative | 732 | 2e-075 |
| C5YIC9 Putative uncharacterized protein Sb07g005470 | 665 | 9e-068 |
| A2YS10 Putative uncharacterized protein | 656 | 1e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59040.2 pentatricopeptide (PPR) repeat-containing protein | 930 | 1e-100 |
| AT3G59040.1 pentatricopeptide (PPR) repeat-containing protein | 930 | 1e-100 |
| AT2G37230.1 pentatricopeptide (PPR) repeat-containing protein | 226 | 5e-019 |
| AT1G03560.1 pentatricopeptide (PPR) repeat-containing protein | 224 | 8e-019 |
| AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein | 221 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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