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Information for unigene UN03735

FASTA Sequence
Unigene ID: UN03735Length: 820 SSR 
AAAATCTTTCTTTTAGCATTCGATGATTACAAAACATATAGTAGTAGTTTTCATAACCCAACAAGTTCTTCCGTCTGTGAGCCAAC
ATAATCCAAAGCCCCTTCTTGTTCTTTATCACACAACACAGTTTCTTTTGCACCATCAATATCATCATCTTCTTCTTCATAGTCAC
CCTCATCTTCATCCTCATCCTCATCCTCATCACTACTAGTGATATAATTGTCTTCATCATCATCATCATCAGTTCGGTAGACTCCA
GCAAGGCTCGCTGTCTTCTCATCTACGAGACCAGTAACTTCCTTAGCTTCTTCCAGCTCATCTTGAGTCGAAGCCAACGACAAGAG
CACATTCTTAGCTTTCTGATCAGGTGGCACTCCACAGCCCTCCATCTCCTTGTACCAACTAAGAGCGCTCCCGAAATCCTTGCACC
TCCCAGACGCATCCATGATAGTGGTCAAAATCGTCTGATTCGCTTTGATGCCACTTAACCTCATTTTCTCGTATACCTCCATAACC
TTATCAAGATCGTTTGCTTTCGCATAACCTTTTATCATCGTCCCATAGGTTACTATATTCGGTTCAAAACCATCCACTTTTATCCT
CTTGAAGAATTTCTCAGCACCCTCCATGTCTGAAGCATTGACATAGGATGATAACATTGTTGTGTAAGAGCATAGATCCGGATAAA
ATCTGTCTCGTCGCATGCTTTTAAACACGGTCTTTGCTTGCTCCACCATTCCAGAAATAGCAAATGCATCAAGCAAAATGTTATAA
GCTTTATGCGTCGGCCTTACACCAGCATCAAGCATCTCTTCAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878256 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata]9455e-100
NP_191463 pentatricopeptide repeat-containing protein [Arabidopsis thaliana]9303e-098
NP_974457 pentatricopeptide repeat-containing protein [Arabidopsis thaliana]9303e-098
CAB86932 putative protein [Arabidopsis thaliana]9303e-098
XP_002298285 predicted protein [Populus trichocarpa]7985e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q9LYT2 Pentatricopeptide repeat-containing protein At3g590409301e-099
Q9ZUU3 Pentatricopeptide repeat-containing protein At2g372302265e-018
Q9LR67 Pentatricopeptide repeat-containing protein At1g03560, mitochondrial2248e-018
Q0WMY5 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic2212e-017
Q9LQ16 Pentatricopeptide repeat-containing protein At1g629102167e-017

TrEMBL top hits (Blast detail)Scoree value
Q3EAH8 Putative uncharacterized protein At3g59040.29302e-098
B9GI17 Predicted protein7983e-083
B9T2X9 Pentatricopeptide repeat-containing protein, putative7322e-075
C5YIC9 Putative uncharacterized protein Sb07g0054706659e-068
A2YS10 Putative uncharacterized protein6561e-066

Arabidopsis top hits (Blast detail)Scoree value
AT3G59040.2 pentatricopeptide (PPR) repeat-containing protein9301e-100
AT3G59040.1 pentatricopeptide (PPR) repeat-containing protein9301e-100
AT2G37230.1 pentatricopeptide (PPR) repeat-containing protein2265e-019
AT1G03560.1 pentatricopeptide (PPR) repeat-containing protein2248e-019
AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein2212e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
122  67%

Unigene MembersMember information