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Information for unigene UN03762
| FASTA Sequence |
| Unigene ID: UN03762 | Length: 766 |
SSR | | CGACACAAAAGCACTCAAAACTGAGTTTTAATTTAAATTCAGACAAAAATATAAGGATTCAGACACTGACTCGGGTAGAAAAAAAA
CTAAAATAATAAAAACAAGCATAGCATCAAACGGCTAAAGGACTTGAGAACACATTCTCTTCTCCATAAGGCTTCTAATCGTCAAA
GGTAGTCTTCGTGCCTGAAAAACTAGGTTTGCTGTATGATCCACGGCCACCACCAGAGTCTCTTCCTCTGCCACCGCCCCTTCTAC
CACCACCAAAACGACCACGGCTACCACCATCTCTTCCTCTGCCACCACCAAAGCGACCACCGCCGCCACCACTGTATCCACCGCCG
CCACCACCGTATCCACCGCCGCCACTGTATCCTCCGCTCCTTCCACCACCACTGAATCCACCACCACCACTGTTGTCCCTCGGTTT
GGACTCGTCAACAACGAGATACCCTCCTGCCGCTTCAGTACCATTAAGGTCAAACGCCTTCTCTGCGGCTTCTTTAAAGTCAATGA
AAGCAATTCCTTTGGAAGAACCAGTTTCACGGTCCATGGGAACAGAGACCCTTGTGATCTCTCCACATGAAGCAAAATGTTCAGTC
AATGCATGCCTGATATCATCCTCAGCAAGAGACGCAGTCGAATCCCTTAACGAAAATCTTTTGACCGTCACCACCACCACCACCGC
TTCTGAAGTTACCACCACCGTTACCGCTTTGTGGAGTGTATGCGGGTCTGTCACCCCTCTCAGCAGCAACATCAAGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAF69708 F27J15.29 [Arabidopsis thaliana] | 416 | 9e-039 |
| NP_175322 nucleolin [Arabidopsis thaliana] | 399 | 8e-037 |
| XP_002891463 hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp. lyrata] | 394 | 3e-036 |
| XP_001689278 AGAP011901-PA [Anopheles gambiae str. PEST] | 246 | 5e-019 |
| EFN84884 Protein diaphanous [Harpegnathos saltator] | 246 | 5e-019 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q05966 Glycine-rich RNA-binding protein 10 | 288 | 3e-025 |
| Q03250 Glycine-rich RNA-binding protein 7 | 283 | 1e-024 |
| Q03251 Glycine-rich RNA-binding protein 8 | 275 | 9e-024 |
| Q03878 Glycine-rich RNA-binding protein | 267 | 8e-023 |
| O70133 ATP-dependent RNA helicase A | 226 | 4e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M994 F27J15.29 | 416 | 6e-039 |
| Q9FVQ1 NuM1 protein, putative | 399 | 6e-037 |
| A7UVF7 AGAP011901-PA (Fragment) | 246 | 3e-019 |
| Q8L685 Pherophorin-dz1 protein | 243 | 7e-019 |
| B7Q3U3 Putative uncharacterized protein (Fragment) | 237 | 3e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding | 399 | 4e-039 |
| AT2G21660.1 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding | 283 | 1e-025 |
| AT4G39260.1 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding | 275 | 8e-025 |
| AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding | 259 | 6e-023 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 223 | 9e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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