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Information for unigene UN03820
| FASTA Sequence |
| Unigene ID: UN03820 | Length: 1754 |
| SNP | GGATATATAAAACTGCAGACACGTATTCAGTAAGGATGCAATTGGGCGAGAGATACTGAGCATAGCGTTTCCAGCGGCTTTGGCTT
TAGCTGCTGATCCAATAGCTTCTCTGATTGATACCGCTTACATCGGACGTTTAGGTGCGGTTGAGCTAGCAGCGGTTGGAGTATCT
ATTGCGATATTCAATCAAGCTTCCAGAATCACGATATTCCCAATTGTGAGCGTTACAACTTCCTTTGTCGCTGAGGAAGACACGAT
TGAGAAGATGAGAGAAGACGAAGCAAAGAAAACTAGTCTTGTTCATGCAAATACTTTAGCTGTTCAAGATTCACTAGAAAAAGGCA
CTGCGTCACCCACAAGTAACAACACTAACCAGCCGCAGCAGACGCCAGCTACAGATACAAAGTCAAACAGCGGGAACAAATCAAAT
AAGAAAGGAAAGAAGAATATCAAATCAGCATCAACGGCCATGATCATAGGCCTAATCCTGGGCCTTGTGCAAGCTATAGTCTTGAT
TTTCAGCTCGAAAGTGCTTCTAGGTGTCATGGGAGTGAAACCGAATTCGGCAGTGTTATCACCAGCTCACAAGTACTTGACCATAC
GGTCACTAGGTGCTCCTGCATTGCTTCTATCGCTTTCCATGCAAGGCATCTTTCGTGGCTTCAAGGACACTAAAACTCCTCTCTAT
GCTACCATCGTAGCAGATGTCATCAATATCATTCTCGACCCGATTTTCATCTTTGTGCTTCACCTTGGAGTCAGCGGTGCAGCCAT
TGCCCATGTCATTTCTCAGTACTTCATGACTCTAATACTATTCATCCGCCTCGCGAGTAAAGTTAATTTGATGCCACCGAACTTTG
GAGCTTTGCAGTTCGGCAAGTTCCTTAAAAATGGGGGACTATTGCTCGCAAGGACCATAGCTGTGACGTTTTGTCAGACACTAGCA
GCAGCAATGGCGGCTCGGCTAGGAACAACACCAATGGCTGCTTTTCAGATCTGTTTACAAGTCTGGTTAACTACTTCTCTCCTTGC
CGATGGTCTTGCTGTAGCCGGTCAGGCGATTCTGGCTTGTTCTTTTGCCGAGAAGGACTATAACAAAGTGTCTTCTGCTGCATCCC
GTGTTCTACAGATGGGTTTTGTGCTAGGACTTGGATTGTCCGTTTTCGTTGGACTAGGACTATACTTTGGTGCTGGAATATTTACT
AAGGACCCTGCCGTTATTCACCTCATAGCCATTGGAATACCGTTTGTAGCAGCAACACAGCCAATAAACTCACTTGCTTTTGTGTT
GGACGGAGTCAATTTTGGAGCATCTGATTTTGCTTACACTGCATACTCCATGGTGGGAGTTGCGGGGATAAGCATAACAGCAATAA
TATACATGGCAAAGTTCAATGGCTTTCTTGGAATATGGATAGCTCTTACCATCTATATGGGTCTCCGAGCTATTACTGGAATCGCC
AGGATAGCAACAGGAACTGGACCGTGGATTTTCTTGCGTGGTCGATCTCCTTCATCTTCCCCTAGGACTTAGCTTATAATGAGATG
CATCTTTTTCTGTCTTTCTTCGCTTTTTGTTGTGTATTTCTTGTGTTCTTTTCACATTTTGCACGAAAGAGCTCTCTATGCTTAAA
CAATCCCAGATAAATAATTTGATTAGGCGAATATCACTTTCTGCAGATCACTTATCAGCATAATACTACTTTTTGCAAACTAACGT
AACTATTACTAAATAGCAAAACATGGTTATTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187461 MATE efflux family protein [Arabidopsis thaliana] | 2184 | 3e-243 |
| XP_002884678 hypothetical protein ARALYDRAFT_478146 [Arabidopsis lyrata subsp. lyrata] | 2173 | 6e-242 |
| XP_002313305 predicted protein [Populus trichocarpa] | 1625 | 2e-178 |
| XP_002532164 DNA-damage-inducible protein f, putative [Ricinus communis] | 1540 | 1e-168 |
| BAF75822 aluminum activated citrate transporter [Hordeum vulgare] | 1477 | 3e-161 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q58119 Uncharacterized transporter MJ0709 | 198 | 2e-014 |
| Q2FJS9 Multidrug export protein mepA | 181 | 2e-012 |
| Q2G140 Multidrug export protein mepA | 181 | 2e-012 |
| Q5HIW0 Multidrug export protein mepA | 181 | 2e-012 |
| Q2YVH4 Multidrug export protein mepA | 176 | 9e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SFB0 At3g08040/T8G24.8 | 2184 | 2e-243 |
| B9HNP6 Predicted protein | 1625 | 1e-178 |
| B9T1P5 DNA-damage-inducible protein f, putative | 1540 | 1e-168 |
| A7M6U2 Aluminum activated citrate transporter | 1477 | 2e-161 |
| B2LUQ8 Aluminum-activated citrate transporter | 1476 | 3e-161 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G08040.1 FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter | 2184 | 1e-245 |
| AT3G08040.2 FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter | 2184 | 1e-245 |
| AT1G51340.2 MATE efflux family protein | 1396 | 3e-154 |
| AT1G51340.1 MATE efflux family protein | 1392 | 8e-154 |
| AT4G38380.1 antiporter/ drug transporter | 838 | 1e-089 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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