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Information for unigene UN03822
| FASTA Sequence |
| Unigene ID: UN03822 | Length: 1267 |
| SNP | GGATCATCAGATATCTCCAAAGCCTTAAAAAGATAACATAAGAATCACCGCAAAGAAAAAAACCACCATGGGAGTACTCGACGAAG
CTTTTATCCAAGCTCCAGAACACAGACCCAAAACTCATCTCAAACACTCCGATGACTACATTCTTTCCAAAGAGATCCCGACCATC
GACCTCTCTTCTCTCCAGGACCCACACTCCGACAAGACAGCGCTCACGACAGAGATTGCAGAAGCATGCATGAGATGGGGTTTTTT
CCAGGTGACCAACCATGGCTTGTCGTTGGACTTAAAGAGTCGGGTTGAGAAGACGATGGCGGATTTTTTCAGTTTACCATTGGAGG
AGAAGAGAAGAGTGAAAAGAGATGAAGTGAACCCTATGGGTTATCACGACGGAGAACATACCAAAAACGTTAGAGACTGGAAAGAG
ATTTTCGATTTCTTTTTGCAGGACTCGACGACGGTTCCGGCGTCTACCGTGCCGGAAGACACCGAGCTCAGGAAGCTGACTAACCC
GTGGCCTCAAAACCCTTCCGACTTTAGGGAGATATGCCAAGAATATGCAAGAGAAGTTGAGAAGCTAGCTTTCAAGCTTTTGGAAC
TTATCTCCATTAGCTTGGGTCTACCTGGTGATCGGTTTACGGGGTACTTCAATGACCAAACAAGCTTTTTGAGGTTTAACCATTAC
CCTCCTTGCCCGAACCCGGAGCTAGCATTAGGCGTTGGACGCCACGCAGACGCAGGAGTTATAACCGTCTTGGCCCAAGATAATGT
GGGTGGGTTACAAGTGAGCCGTAGATCGGATGGACAATGGATCTCGGTGAAACCAAACCCTGATGCTTTCATCATTAACATTGGCA
ACTGCATGCAGGTATGGACAAATGACAAATATTGGAGTGCAGAACATAGAGTGGTAGTGAATTCAAGCAAAGAGAGATTCTCAATG
CCATTCTTCCTGTTTCCATCCCATGAAGTCAACATTGAGCCATTGGAGGAGTTTATAACCGAAGACAACCCGCCTTGTTACAAAAA
GTACAATTGGGGCAAGTTCTTTGCTGCGAGAAACAGAAGTGATTACAAAAAGCTCCAAGGTGAGAGCATCCAGATTGATCATTTCA
AGGCCGCTTAAGTAATCTTACTATGTTTATTAGCACAACATTTCCTAATAATGTCAATGAGCAAGACTCATGTGCTTACCTTCTAT
ATCAATATGTAGTTGAGATGTATTGTGTTTATTTTATAATAATTACAGAAGCACTCACCCTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566623 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1581 | 2e-173 |
| XP_002885288 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1568 | 5e-172 |
| XP_002313083 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] | 1265 | 7e-137 |
| XP_002885289 hypothetical protein ARALYDRAFT_479418 [Arabidopsis lyrata subsp. lyrata] | 1214 | 6e-131 |
| NP_566624 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1206 | 5e-130 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39110 Gibberellin 20 oxidase 1 | 497 | 3e-049 |
| Q39111 Gibberellin 20 oxidase 2 | 473 | 2e-046 |
| Q39112 Gibberellin 20 oxidase 3 | 472 | 3e-046 |
| P24397 Hyoscyamine 6-dioxygenase | 463 | 3e-045 |
| P0C5H5 Gibberellin 20 oxidase 2 | 446 | 3e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJ66 Oxylase-like protein | 1581 | 1e-173 |
| B9HRV6 2-oxoglutarate-dependent dioxygenase | 1265 | 5e-137 |
| Q8L9Z7 Putative uncharacterized protein | 1206 | 3e-130 |
| Q9LJ65 Oxidase-like protein | 1206 | 3e-130 |
| B9RZI6 Gibberellin 20 oxidase, putative | 1187 | 5e-128 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19000.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1581 | 6e-176 |
| AT3G19010.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1206 | 2e-132 |
| AT3G19000.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1178 | 3e-129 |
| AT3G19010.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 873 | 8e-094 |
| AT4G25420.1 GA20OX1; gibberellin 20-oxidase | 497 | 3e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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