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Information for unigene UN03833

FASTA Sequence
Unigene ID: UN03833Length: 548 SSR 
GGGCCGTCCCACAGACACACCAAAAAACCCTAAAACCACTTCTCCTCAAAGCTGCCCCCAATGTCGAAGAAGCGTAACCCTCTCGA
AGATCCACCCGCCGCATCCTCAAGCGACGACGAAGAAGTCGAGTCTTCCGCCGAGGAAGAAGAAGAAGAAGAGGACGACGACTCCT
CATCCGAAGAAGACGCTCCCGCCAAACCTCCTTCCTCCTCCGCCGCCGCCGTCACAATCGCCGTCCCAGGCAAACCCACCGCCTCC
CTCCCCGCCGCCACACAAGCCTCCGATTCAGAGTCCGGATCCGAGACCGAGACCGACTCCGAATCTGAGCCCGAGCAGCCAACGAA
AAACAAGGGATCTGGCAAAGCCATCCTCACCGCCAAGCCCGCTTCTCCTCCTCCTCCGGTTGCCCTAGCTTTACCGGCGAAGAAAT
CAGGAGCTAAGCGGCCTAGCGAAGTCTCCTCTTCCAAGGAGACGACGAACTCGAAGCGTGTCAAGAAGGATGTTGGGGATAAGAAG
ATGGGAGAGGACTCGAAGAAGCCCGGCGCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886513 hypothetical protein ARALYDRAFT_475156 [Arabidopsis lyrata subsp. lyrata]3197e-028
CAB62280 hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f. nagariensis]2041e-014
XP_002955432 hypothetical protein VOLCADRAFT_96399 [Volvox carteri f. nagariensis]2004e-014
XP_002951232 hypothetical protein VOLCADRAFT_61191 [Volvox carteri f. nagariensis]1996e-014
XP_002945770 pathogenesis-related protein 1-like protein [Volvox carteri f. nagariensis]1952e-013

Swiss-Prot top hits (Blast detail)Scoree value
P21997 Sulfated surface glycoprotein 1851886e-014
Q9T0K5 Leucine-rich repeat extensin-like protein 31823e-013
P40603 Anther-specific proline-rich protein APG (Fragment)1635e-011
Q9FPQ6 Vegetative cell wall protein gp11601e-010
P21260 Uncharacterized proline-rich protein (Fragment)1412e-008

TrEMBL top hits (Blast detail)Scoree value
Q9SBM1 Hydroxyproline-rich glycoprotein DZ-HRGP2041e-014
B9HWP9 Predicted protein (Fragment)1871e-012
Q4A2U1 Putative membrane protein1852e-012
Q3HTK5 Pherophorin-C2 protein1842e-012
Q4A2B5 Putative membrane protein1842e-012

Arabidopsis top hits (Blast detail)Scoree value
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein1941e-015
AT4G13340.1 leucine-rich repeat family protein / extensin family protein1823e-014
AT2G14890.2 AGP9 (ARABINOGALACTAN PROTEIN 9)1635e-012
AT2G14890.1 AGP9 (ARABINOGALACTAN PROTEIN 9)1635e-012
AT4G22485.1 Encodes a Protease inhibitor/seed storage/LTP family protein1563e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
111  50%

Unigene MembersMember information