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Information for unigene UN03854

FASTA Sequence
Unigene ID: UN03854Length: 1121 SSR 
GGAAGAGGAAGAGTCAAAACGCTCTGAACCTCTCTCTCTCTCAGAAGAAGAAAGACGATGAAGAAGAGGACGATATACTCATGGGG
AGCATCGATCGTAATCTTCCTCGTTCTCATGATCGTCACTCCGACCATCCCTCAATCTCAAGCCTATCACGATTTCGCCGATCAAC
GCTCCTTCTTCGGGATTCCGAATGCTCTCAACGTCATCTCCAACTTCCCTTTCCTCATCATCGGTCTCCTCGGTCTCGTCCTCTGC
TTTTACCCCGATGATTACTTCAGATTCAGTTTGCGAGGTGAGAAGTTGGGATGGACTTGCTTTTTCGTCGGTGTGGCCGCTGTTGC
TTTCGGATCTTCTTACTATCATCTCCACCCTGACGATGCTCGCCTCGTCTGGGATCGCCTTCCTATGACTATTGCCTTCACGTCCA
TCATGGCTATATTTGTGATCGAGAGGATTGATGAGCACAAGGGCACTTACTCCATCGTCCCTTTGCTTCTCGTTGGCCTTGTTAGC
ATTCTCTACTGGAGGTTTTTCGATGATCTTCGTCCATATGCTTTAGTCCAGTTTGTTCCCTGCATTGTCATTCCACTTATGGCTAT
CCTGTTACCTCCCATGTATACACATTCCACCTATTGGCTCTGGGCTGCAGGATTCTACCTCTTAGCGAAAGTGGAAGAGGCTGCAG
ATAAGCCGATATATAGCTGGACGCATCATATTCTTAGTGGCCATTCTATAAAGCATTTGTGCGCTGCTATGGTCCCTGTCTTCCTT
ACCCTCATGCTCGCTAAAAGAAGCGTTCAAACCGAGAGGATTAGCTTGTATACGACATGGAAGATATCATGGAAGAGGAGTAGAGG
GAAAGGATCAGAGGAAGAGAGCTTCGAGTGTACTTACTCCAACGTAGCAGTCGAAGAGTCTCGATAGAGGTTATGTTGGTGGTTAA
TGTAAGATCCATCTTTTACTTTCGATAGTGTGTGTTTAAGATCATTGGCAAATGGAGCTTAGTTATATAGCCGTATAGGTGGGGTA
GAGGTTGGTGATTCAAATGGAAAACTCATGAGCTTGTGTAATCTTATTACATTTCATAGTGGTAACAACACTTTGATGTTATTATG
ATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888824 hypothetical protein ARALYDRAFT_476250 [Arabidopsis lyrata subsp. lyrata]12933e-140
NP_177275 senescence associated protein 18 [Arabidopsis thaliana]12844e-139
CAN77049 hypothetical protein VITISV_039116 [Vitis vinifera]11975e-129
XP_002267621 PREDICTED: hypothetical protein [Vitis vinifera]11966e-129
ACU19396 unknown [Glycine max]11383e-122

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C989 At1g7119012843e-139
A5BM72 Putative uncharacterized protein11973e-129
C6TC44 Putative uncharacterized protein11382e-122
B7FKE9 Putative uncharacterized protein11364e-122
B9STE7 Putative uncharacterized protein11212e-120

Arabidopsis top hits (Blast detail)Scoree value
AT1G71190.1 SAG18 (SENESCENCE ASSOCIATED GENE 18)12841e-141
AT5G11870.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: SAG18 (SENESCENCE ASSOCIATED GENE 18) (TAIR:AT1G71190.1); Has 117 Blast hits to 115 proteins in 40 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).6613e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  17%
 
104  67%
 
91  17%

Unigene MembersMember information