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Information for unigene UN03858

FASTA Sequence
Unigene ID: UN03858Length: 1599 SSR 
GTCTCTGATTCTGACGACGACCTTTGACCGCAAATCGTCTCGCAGAGCAGTTGAGAGCTTCTAAATCGTTTTGGCAATGGATAAAG
GAGCACCTCCTCCTCCTCCTCCCAGCATATTTGTGAACGATGGGTCCTTCATGGAAAGATTCAGACAGCTTCAACAGGAGAAGAAA
GATGAAGCCAAGGATAAGGAGGCTCCCCATGTTGTTGTTGAGGAGTCCAAGCCTGTGAAGATTATTATATCTGGGATTTCTAATCC
TAGGCCTTCTTCTTCTGCTACTAAAACTTCCATTGGGTTTAAGACCAATGATGCACAGAAGAAAGGTGGTAAGCTTGCCTTCAGCT
TGAAGCAAAAGTCTAAGCTTCTCGCACCTCCTGTGAAGCTTGGTGAAGAAGAGGATGATGAGGATGTGCAGAATGATCAAAGCTTC
GGATCTGCTAAGCGTCCAAAGTTAGACGCACCTGCCAAGTCAACCAAACTCTCAGATGTTGTTGTTGGTAATGGCTGTTTATATAG
TAAATGTATATATATGTCTTTGGGTGGGTCTTTTGTGCAGTTTCTTCCTTAACCAACAATCCAATTTCTGGAAAAGACTTGGAATA
TCTGCCACGCCTGCTAGCCCCAACAAGAGTGATTTGCGTTCATTGGTATTAATCAGTTTTATAAGTGATTGTGCAGCACCTCCTGC
GCCCAGTGACCCTAATGTGAAGAATGCTGCTGACAAATTAGCAAGCTTTGTTGCTAAGAATGGAAGGGCATTTGAGAATGTTACAC
GCCAAAAGAATCCTGGGGATACACTATTTAAGTTTCTTTTTGATGAGAGCTGTGCTGATTACAAGTACTATGCATTCAGGCTGTCT
GAAGAGGAAAAATCTATTTCACAAGCCAAGGAATCTGGTGTACTTCACAGTGGTGATGGAGGCCCGCGGATGTCCACCACACCAAT
CACTTCCCAAAAGCCAGCTCAGCAACAAAGAGGCTATCAGACCCCTGCTTCGGCTCTCTATGATGCTTCTGTAGAATCTGGAGCTT
CCTCTAGATCTGTTCAGGCATCAGTTACAAGACCAAACAACAGCGACTCTTATAGTGCGCCGAGGGCTGCAGACCCTATTTCTATG
ATGGAGTTTTACATGAAAAAGGCTGCCCAAGAAGAAAAGATGAGACGCCCTAGACAGTCAAAAGATGAAATGCCCCCGCCAGCTTC
TCTTCAAGGTTCATCTGCTATTCCCTCGACAGACTCCGGAAAGAGAGGTCATCACATGGGTGATTATATCCCACCGGAGGAGCTAG
ATAAGTTCCTTGCAAAGTGTGACGATGTAGCTGCATTGAAAGCCACAAAGGAGGCAGCTGAGAAGGCTAAGATCCAAGCAGATAAT
GTGGGACATAAGCTCTTGTCAAAAATGGGTTGGAAAGAAGGTGCTTACTTGCCTCGCTCTATCTGTAAACTTGTGACCTAGTTTCT
TTCTGTATCTTGTGCCTTTATGGAGACAAGGAGGTTAAAAAATTGGAGGAGTGGGTTGGTTACAGGTGAAGGTATAGGAAGCTCTA
GAAAGGGTATGGCAGACCCGATATGGCAGCGATGTAAAGACTAACAACTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001118822 Splicing factor 4-like protein [Arabidopsis thaliana]11842e-127
XP_002876126 hypothetical protein ARALYDRAFT_323761 [Arabidopsis lyrata subsp. lyrata]10562e-112
NP_566957 Splicing factor 4-like protein [Arabidopsis thaliana]10481e-111
CAB41332 gamma response I protein [Arabidopsis thaliana]10427e-111
XP_002264043 PREDICTED: hypothetical protein [Vitis vinifera]8151e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q94C11 Splicing factor 4-like protein10486e-113
Q8IWZ8 Splicing factor 41435e-008
Q8IWX8 Calcium homeostasis endoplasmic reticulum protein1321e-006
Q8CGZ0 Calcium homeostasis endoplasmic reticulum protein1321e-006
Q8CH02 Splicing factor 41321e-006

TrEMBL top hits (Blast detail)Scoree value
B3H4X1 Uncharacterized protein At3g52120.211842e-127
B9HNL7 Predicted protein8006e-083
B9RHH0 Arginine/serine rich splicing factor sf4/14, putative7881e-081
B9GFQ8 Predicted protein7746e-080
B3TLK2 Gamma reponse I-like protein7631e-078

Arabidopsis top hits (Blast detail)Scoree value
AT3G52120.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein11849e-130
AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein10485e-114

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  20%
 
181  20%
 
212  40%
 
111  20%

Unigene MembersMember information