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Information for unigene UN03868

FASTA Sequence
Unigene ID: UN03868Length: 790 SSR 
GGGCCCAAAACCCTAGCAACGGAACCGAAAGTGGAGATAGCTAAGGAGGAGAAGGTCAAAGAGACTGATGGTGAGATCGAAGACGG
AGTGAAAGAGAAAGAGAAAAAGAAGAAGAAGAAGACCAAGTCGAAAGCTGCCGAGTCTGAGACTTTGGGTGATGAGGAGAGAGTTT
CCAAGAAGAGAAAAAGATCAGAGCCTGAAGAAGAGACAAAAGAACAGACAGATGATGATGATGAGGACTCTAAACGTAGGAAGAAG
GAAGATATGGATGTTCAAGAAACACCTGTTAAGCAAACTGATGTTGAGGAGAACGGTAACGTTGAAACAAAATCAACTAATAAGAA
GTCTGGAAAGGGGCTTTCTGACTCTAAAGAGCCGAAGAAACCGTTTCAGAGAGTGAACGTTGAGGAAGTTGTGTTCACTGACGATA
GGCTTAAAGACAACTCTTATTGGGCCAAGGGTGGTGCTGATTCGGGCTATGGTGCTAAAGCTCAAGAGGTTCTAGGGCAAGTCAGA
GGAAGGGGTTTCCGACATGAGAAGACGAAGAAGAAAAGAGGAAGCTACAGAGGAGGAGAGATTGATCTTCAATCACATTCAGTTAA
GTTTGAGTACTCAGACGATGAATGATGATCATTTATCAACACTTTCTTATTCTCACTGTTTCCTTTGCTTCTCTTTTTGATTCTCA
TTTTGTTTTGCTTATTTCAATATGTAAAACTATTCATGTTTTGTCTGTGTTAATGTTCCCATCTGGAACTTGCGGGAAGAAGATTC
TGTTTCAGTTCAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]7001e-071
NP_200522 uncharacterized protein [Arabidopsis thaliana]6982e-071
AAM61154 unknown [Arabidopsis thaliana]6982e-071
AAK74044 AT5g57120/MUL3_6 [Arabidopsis thaliana]6239e-063
CBI17891 unnamed protein product [Vitis vinifera]4931e-047

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 12686e-023
Q14978 Nucleolar and coiled-body phosphoprotein 12614e-022
P32583 Suppressor protein SRP402005e-015
Q9P785 LisH domain-containing protein C1711.051754e-012
A5E4P1 Protein PXR11621e-010

TrEMBL top hits (Blast detail)Scoree value
Q8LFX8 Putative uncharacterized protein6981e-071
Q9LU74 AT5g57120/MUL3_66981e-071
Q93WC7 AT5g57120/MUL3_66236e-063
B9HAX3 Predicted protein4524e-043
B9IN49 Predicted protein4507e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).6988e-074
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase1404e-009
AT3G28770.1 unknown protein1404e-009
AT3G29075.1 glycine-rich protein1352e-008
AT3G05060.1 SAR DNA-binding protein, putative1306e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
102  67%

Unigene MembersMember information