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Information for unigene UN03880

FASTA Sequence
Unigene ID: UN03880Length: 503 SSR 
GTGTGGCTTTGGACAGAGAGATGAAGGAGATGCAAGAGAGAATGGCGAGCAGGCATGTCTACGAGGTATCAGGAAGAGCTTACATT
CTCTCTGGACTTAGTTCACACTCATGGCAAAGAGCAACATCGAGAGGAGAATCAGGAGATGGTTTTAGCTTTGTACAGGCTTATAA
TTACCAGACTCCATCAATGGTTGAGATGCTGCACAGATCACAAGCCACATCGTATCATAGACTCATCCAGCCGTTGCTGTCATATG
TATCTCAACCAAAGCCAAGGTGAAAAAGAAGTGTCAGAAACCAATGTCTTTAGCTGTAACATGTGTCCAGCCTTTTTTGGGTCTAG
TTTTGGGGTTTTTTTTGCTCTGTAAAGAAATAAGAAGAAAGCAGACAAAGGGGTTTTGAAATGTGAATCTAAATTTGGCGGTTTTG
TAAGTTGATGATGTTGTTTCAACTTGTCTATGTAATGTATATTATTATTATTATTATATGTATGCATTTGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL77698 At2g38970/T7F6.14 [Arabidopsis thaliana]3931e-036
AAC79610 putative retroelement pol polyprotein [Arabidopsis thaliana]3931e-036
NP_850306 C3HC4-type RING finger-containing protein [Arabidopsis thaliana]3931e-036
XP_002311085 predicted protein [Populus trichocarpa]3374e-030
NP_191038 C3HC4-type RING finger protein [Arabidopsis thaliana]3366e-030

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8S9I2 At2g38970/T7F6.143931e-036
Q9ZV10 Putative retroelement pol polyprotein3931e-036
B9HLK2 Predicted protein3373e-030
Q2V3P2 Putative uncharacterized protein At3g54780.33364e-030
Q2V3P3 Putative uncharacterized protein At3g54780.23364e-030

Arabidopsis top hits (Blast detail)Scoree value
AT2G38970.1 zinc finger (C3HC4-type RING finger) family protein3992e-039
AT3G54780.1 zinc finger (C3HC4-type RING finger) family protein3373e-032
AT3G54780.2 zinc finger (C3HC4-type RING finger) family protein3373e-032
AT3G54780.3 zinc finger (C3HC4-type RING finger) family protein3373e-032
AT5G60710.1 zinc finger (C3HC4-type RING finger) family protein2324e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
112  67%

Unigene MembersMember information