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Information for unigene UN03884
FASTA Sequence |
Unigene ID: UN03884 | Length: 882 |
SSR | | CGTAACTTCTCCACTATTCGAAATTACATATACAGTTTCTGATGACGTCGCCAGCGATTGATCAAGAGAACGTTGCTCCTATGGAG
GGAGTCAACACGTCGGTGAGCGAGAAGAAGAAACCTGCAGCGAAGGGAGGCAAGACGAAGAGAGCTAAGGAAGTGAAGGTGAAGGA
GAAGAAGAAGACTGTGAAGAAAGCTGTCTCAACTCATCCTACTTACGAAGAGATGATCAAAGATGCGATCGTTACGCTGAAGGAGA
GAACCGGATCGAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCATAAGGTGCTCTCGCCTTCGTTCAGGAAGCTGCTGCTT
CTCAATCTGAAGAGACTCGTCGCTTCCGAGAAGCTTGTCAAGGTCAAGGCCTCGTTTAAGATTCCGTCGGCTAAACCATCATCATC
CCCCAAAGCGGCGGCTGCTACATCTGCTCCGGTGAAGAAGAAGAAGAAACCTACCACTGCCGCGGCGACTTCCAAGCCGAAGGGGA
AGAAGGTAACCGCAGCTTCCAAATCCAAGGGAGCTAAGGTGTCTAAGAAACCAACTGCTCGTAAGGCCACTGTTGCGCTCACGAAT
AAAGCTGTTAAGGCTGAGCAGAGACCAGCCAAGGCAGCGAAAACATCATCGAAGGTTACATCTCCGGGGAAAAAGGCTCTTCCTTC
TAAGAAGAGTGTGAAGCCAAAGACGGTGAAGTCTCCAGTGAAGAGGGCTTCAAGGATGGCCAAGAAGTGAAATTAGGGCTTAGTGT
TGACGATCTTGGTAGTAGCTTACTCTCTAGGCGTTAATCTTGTATATCTTTTCTTTATCTCTATTTAAAGTTCTCGTGGTTTCATA
TATAAATAGCTAAATCCTTTTC
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GenBank top hits (Blast detail) | Score | e value |
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata] | 554 | 1e-054 |
NP_172161 histone H1.1 [Arabidopsis thaliana] | 522 | 6e-051 |
NP_180620 histone H1.2 [Arabidopsis thaliana] | 515 | 4e-050 |
CAA44312 histone H1-1 [Arabidopsis thaliana] | 496 | 6e-048 |
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata] | 481 | 3e-046 |
TrEMBL top hits (Blast detail) | Score | e value |
B9GS56 Histone H1 | 433 | 8e-041 |
B9SZ53 Histone h1/h5, putative | 430 | 2e-040 |
Q84NG0 Histone H1 (Fragment) | 418 | 5e-039 |
B9H8I5 Histone H1 | 411 | 3e-038 |
A5BTS5 Putative uncharacterized protein | 406 | 1e-037 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G06760.1 histone H1, putative | 530 | 3e-054 |
AT2G30620.1 histone H1.2 | 515 | 2e-052 |
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 238 | 2e-020 |
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 201 | 4e-016 |
AT1G49950.3 DNA-binding protein, putative | 128 | 1e-007 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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