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Information for unigene UN03884

FASTA Sequence
Unigene ID: UN03884Length: 882 SSR 
CGTAACTTCTCCACTATTCGAAATTACATATACAGTTTCTGATGACGTCGCCAGCGATTGATCAAGAGAACGTTGCTCCTATGGAG
GGAGTCAACACGTCGGTGAGCGAGAAGAAGAAACCTGCAGCGAAGGGAGGCAAGACGAAGAGAGCTAAGGAAGTGAAGGTGAAGGA
GAAGAAGAAGACTGTGAAGAAAGCTGTCTCAACTCATCCTACTTACGAAGAGATGATCAAAGATGCGATCGTTACGCTGAAGGAGA
GAACCGGATCGAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCATAAGGTGCTCTCGCCTTCGTTCAGGAAGCTGCTGCTT
CTCAATCTGAAGAGACTCGTCGCTTCCGAGAAGCTTGTCAAGGTCAAGGCCTCGTTTAAGATTCCGTCGGCTAAACCATCATCATC
CCCCAAAGCGGCGGCTGCTACATCTGCTCCGGTGAAGAAGAAGAAGAAACCTACCACTGCCGCGGCGACTTCCAAGCCGAAGGGGA
AGAAGGTAACCGCAGCTTCCAAATCCAAGGGAGCTAAGGTGTCTAAGAAACCAACTGCTCGTAAGGCCACTGTTGCGCTCACGAAT
AAAGCTGTTAAGGCTGAGCAGAGACCAGCCAAGGCAGCGAAAACATCATCGAAGGTTACATCTCCGGGGAAAAAGGCTCTTCCTTC
TAAGAAGAGTGTGAAGCCAAAGACGGTGAAGTCTCCAGTGAAGAGGGCTTCAAGGATGGCCAAGAAGTGAAATTAGGGCTTAGTGT
TGACGATCTTGGTAGTAGCTTACTCTCTAGGCGTTAATCTTGTATATCTTTTCTTTATCTCTATTTAAAGTTCTCGTGGTTTCATA
TATAAATAGCTAAATCCTTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]5541e-054
NP_172161 histone H1.1 [Arabidopsis thaliana]5226e-051
NP_180620 histone H1.2 [Arabidopsis thaliana]5154e-050
CAA44312 histone H1-1 [Arabidopsis thaliana]4966e-048
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]4813e-046

Swiss-Prot top hits (Blast detail)Scoree value
P26568 Histone H1.15223e-052
P26569 Histone H1.25152e-051
Q9M5W4 Histone H14246e-041
P37218 Histone H13871e-036
P08283 Histone H13719e-035

TrEMBL top hits (Blast detail)Scoree value
B9GS56 Histone H14338e-041
B9SZ53 Histone h1/h5, putative4302e-040
Q84NG0 Histone H1 (Fragment)4185e-039
B9H8I5 Histone H14113e-038
A5BTS5 Putative uncharacterized protein4061e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G06760.1 histone H1, putative5303e-054
AT2G30620.1 histone H1.25152e-052
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2382e-020
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2014e-016
AT1G49950.3 DNA-binding protein, putative1281e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  100%

Unigene MembersMember information