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Information for unigene UN03892
| FASTA Sequence |
| Unigene ID: UN03892 | Length: 771 |
SSR | | GGTGGTCCTCATCTTTTCTGCTGCTTACATTATACACATCTTCTCTCTCTCTCTGGTAGCCATGGCTTCGGCTACTTTCTCTGTGG
CCAAACCATCTCTTCAGGGTTTCTCTGACTTCTCAGGACTCAGAAACTCCTCTGCTCTTCCCTTGGGCAAGAAAACTTCTTCTGAT
GAGTTTGTTTCCTTCGTCAGTTTCCAGACTTCTGCAATGGGAAGCAATGGAGGATACAGGAAAGGAGTGACCGAGGCGAAGCTAAA
GGTAGCCATCAATGGATTCGGTAGGATCGGTAGGAACTTCTTGAGATGTTGGCATGGTCGCAAAGACTCTCCTCTTGATGTCATTG
CCATTAACGACACTGCAGGTCTCGAAGAAGACTTTCGCTGAGGAAGTCAACGCTGCCTTCAGGGATGCGGCTGAGAAAGAGCTTAA
AGGTATACTCGATGTTTGCGATGAGCCTCTTGTCTCTGTCGACTTCAGGTGCTCTGATGTGTCGTCCACCATTGATTCTTCTCTGA
CCATGGTTATGGGAGATGATATGGTTAAAGTGATTGCTTGGTATGATAACGAATGGGGTTACTCGCAGAGAGTCGTTGATTTGGCT
GACATTGTTGCCAATAACTGGAAGTGAAGAAAGACTCAACTGTTGATGTTGTTCTGCTCCATTTTTTATTTTACTGTTATTATTAT
GATTCGGAATGTATAATTGTAGTTCCTGAGTTTATATGTATTTGTGCTCTTCAAATTTTAATAGTAAAAAAGCTTTATATTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ10475 glyceraldehyde-3-phosphate dehydrogenase [Brassica rapa subsp. chinensis] | 508 | 2e-049 |
| XP_002892719 GAPA-2 [Arabidopsis lyrata subsp. lyrata] | 491 | 2e-047 |
| NP_172750 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [Arabidopsis thaliana] | 480 | 3e-046 |
| P09672 RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic; AltName: Full=NADP-dependent glyceraldehydephosphate dehydrogenase subunit A | 462 | 4e-044 |
| NP_001077529 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [Arabidopsis thaliana] | 462 | 4e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P09672 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) | 462 | 2e-045 |
| P25856 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 451 | 4e-044 |
| P09043 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) | 445 | 2e-043 |
| P19866 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 427 | 2e-041 |
| P12858 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 425 | 4e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LPW0 At1g12900 | 480 | 2e-046 |
| B3H4P2 Uncharacterized protein At1g12900.3 | 462 | 3e-044 |
| C0Z2Y9 AT1G12900 protein | 455 | 2e-043 |
| Q570E5 Glyceraldehyde 3-phosphate dehydrogenase A subunit | 451 | 5e-043 |
| A9PI59 Putative uncharacterized protein | 443 | 5e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12900.1 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 480 | 1e-048 |
| AT1G12900.2 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 463 | 1e-046 |
| AT1G12900.3 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 463 | 1e-046 |
| AT3G26650.1 GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase/ protein binding | 452 | 3e-045 |
| AT1G42970.1 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | 359 | 2e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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