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Information for unigene UN03895

FASTA Sequence
Unigene ID: UN03895Length: 1049 SSR 
GGGTTTGTTTGTATCCTTCTTCCTCTCTCTCTCTCTCTCTCTCTCCGCCGCATTACGTCTCTCTCTCTCAATCTCTCAGCTTAAGC
GCAGAACCATGGCAGCGAAACAGGGAGCCGCAGCTACAACGTATTCACCAAAAATCATGGCGAGAACTCGGCCTCCTATCTTCAGA
GGCTCCGACCTCGATTGGACCCGTCCTGATGGTCGTGGATTCCACCAATGCCGACCTGCCTTACTTCAAACGGGTGCTGTGAGTGC
TGCTTCTGGTTCTGCTTATGCTGAGTTTGGGAACACCAAAGTCATTGTTTCTGTATTTGGGCCAAGGGAGAGTAAGAAAGCAACGA
GTTATAGTGATGTTGGTAGATTGAACTGCAATGTTAGCTACACTACTTTTGCTTCCCCGACCCTTGGTATTCAGGGGACTGATCAC
AAAGAGTACTCATCAATGCTTCACAAAGCGTTGGAAGGCGTAATCATGATGGAGACGTTTCCAAAGACAACCGTTGATGTTTTTGC
GCTGGTGCTTGAGTCTGGAGGCAGTGACCTCCCGGTTGTGATATCGTGTGCTGGTCTTGCTCTAGCAGACGCCGGGATTATGATGT
ATGACCTTATCACAGCTGTCTCAGTGTCTTGCATAGGAAAAAGCCTTATGATTGACCCGGTTACAGAAGAGGAAGGATGTGAAGAT
GGAAGCTTCATGATGACGTGCATACCTTCTCGGAGTGAAGTCACTCAGCTGACCATCACTGGTGAATGGACAACGCCTAACATTAA
CGAGGCAACGCAGCTTTGCGTGGATGCTTGTTCCAAACTTGGAGAAATCATGCGCGATTGTTTGAAACAGGCTGTTTCAGCTTCAG
ATGAATGAACATACAACTCAAGAAACTATAGCGATGATTGTACCTCAGCCACTGGTATGAAACCGGTTAAGCTGTTGGGTTAGGTA
AAATTGAATTTATACTAAACTGGTGTGATGGAGTTCAAAACAGATGTACTGTGCTACGTCAAATTTTGATGGAACTAGATCTTTAA
AGAGCGTCATTTGCTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194479 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]11851e-127
XP_002869560 hypothetical protein ARALYDRAFT_492045 [Arabidopsis lyrata subsp. lyrata]11851e-127
XP_002314284 predicted protein [Populus trichocarpa]9734e-103
XP_002285257 PREDICTED: hypothetical protein [Vitis vinifera]9725e-103
ABK96391 unknown [Populus trichocarpa x Populus deltoides]9691e-102

Swiss-Prot top hits (Blast detail)Scoree value
O26779 Probable exosome complex exonuclease 13144e-028
Q97BZ5 Probable exosome complex exonuclease 12983e-026
A3MUP1 Probable exosome complex exonuclease 12949e-026
A9A5C9 Probable exosome complex exonuclease 12912e-025
A0RXU1 Probable exosome complex exonuclease 12903e-025

TrEMBL top hits (Blast detail)Scoree value
A2RVK7 At4g2749011857e-128
B9HQC2 Predicted protein9733e-103
A5BI33 Putative uncharacterized protein9724e-103
A9PJ38 Putative uncharacterized protein9698e-103
B9MZ65 Predicted protein9681e-102

Arabidopsis top hits (Blast detail)Scoree value
AT4G27490.1 3' exoribonuclease family domain 1-containing protein11863e-130
AT3G61620.1 RRP41; 3'-5'-exoribonuclease/ RNA binding2643e-023
AT3G61620.2 RRP41; 3'-5'-exoribonuclease/ RNA binding2643e-023
AT3G46210.1 3' exoribonuclease family domain 1-containing protein1792e-013
AT3G46210.2 3' exoribonuclease family domain 1-containing protein1792e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information