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Information for unigene UN03914
| FASTA Sequence |
| Unigene ID: UN03914 | Length: 1166 |
SSR | | GGGATTCATTCCCACCACTGGTGAGAAATGCGATTCCTCGAGGAACTACCGTTGTCACCTTCCCTGATTTCTTCACAGCTAAACCC
TAATTCAACCGCCAAAGGCTATGGCGGCGGCGGCGGCTGGTTTATCGGCGGAGGATGGGTCGATAGGTGCCATGGGTTTCTCCACA
ACACGGTTCTCGTGGCTGCTTCTCTCTTCTTCGTCGCTTACTTGGCTTACGAGGCGAAGAAGAGCTTCTCCAAGTTCTCGAATAAT
CTGAGATCTTTCATCATGATCGGTTACTACGGCTCTCTTTGGCTCGTTAGCTTGCTCAATCTTGCTTGGTGCTGTCTCCAGGGTTG
GGAATGCACTCCTGGGAAGGAAGTAGCTTGGAATCTGTTGACTTTGTTCACAACATCTGGAATGTTGTTCCTGGAAGTAAGCTTGG
TGGCGTTTCTCTTCCAAGGGAACTATGCAAGCGGTGCACAAGCATTAACTAGAACTTTCGTAATCTCAGGGTTTGTTATTGCTCTC
GATTTACTTCTCAAGGCGCTTTATCTCTTTGGGTTTGGTGTGCCGTTGTTCATTGACAACAATGAGAATGTACAAAAGTACAAATG
GGGATTATGGATCATTCACAAGCTTTTACTCACTGGCGTTTATGGGGTGATATTTTTCATGTACAACTCTGGCTGGAGAGAAAGAT
TACCCGCAAGGCCTGCATTTTACAAGTACATAACCATCATGTTCGCCTTGTACGGACTCTACCTAGTTGCATCTGCGTTTACTGCA
AACGGTGCTCACTTTGGATTCTGGTTGTATGGGGTCATGGGTGTCTGCTACCACGCGTTATACCTTCCTCTTCTTTACATTACTTT
TCTCGCAGACTTCTTCCAGGAAGAAGATCTGAACTTGGAGAATGTATACTATTCAGAGATGAAGGATGCTGGCTTTTTCGATGCTG
ACTGGGAATAGGACTCTTAGTGTAGCTTCTTCATCTTCTGAAACTGTGAATAGAAGTTCGGTAGGAGTCAATGTATTGCCGCTTTT
TTCAAGGCTTTAGTTTTCAGTTGTGCGTTATGTGACTGTACTACGTGTGTGTCTGTACTTTCGAGTAAAACATGTAACATCAAGGT
TCTTCTCTGTTCCTCAAACTGATTAATCTGAAAGAAGGCTTTTGTAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198073 uncharacterized protein [Arabidopsis thaliana] | 1315 | 1e-142 |
| AAM67148 unknown [Arabidopsis thaliana] | 1307 | 9e-142 |
| XP_002872286 hypothetical protein ARALYDRAFT_489607 [Arabidopsis lyrata subsp. lyrata] | 1300 | 6e-141 |
| NP_566244 uncharacterized protein [Arabidopsis thaliana] | 1273 | 8e-138 |
| AAK63964 AT5g27210/T21B4_120 [Arabidopsis thaliana] | 1270 | 2e-137 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L8S4 Putative uncharacterized protein | 1307 | 6e-142 |
| Q94AH1 Putative uncharacterized protein At3g05010 | 1273 | 5e-138 |
| Q94BV6 AT5g27210/T21B4_120 | 1270 | 1e-137 |
| B9REW7 Putative uncharacterized protein | 1109 | 5e-119 |
| B9MZL6 Predicted protein | 1067 | 4e-114 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27210.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, transmembrane-40 (InterPro:IPR018781); BEST Arabidopsis thaliana protein match is: transmembrane protein, putative (TAIR:AT3G05010.1); Has 99 Blast hits to 99 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 1316 | 3e-145 |
| AT3G05010.1 transmembrane protein, putative | 1289 | 4e-142 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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