Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN03945

FASTA Sequence
Unigene ID: UN03945Length: 1272 SSR 
CGAAATATAAATGTCGTATTACTGTATAAAAGAAGTATTGCAAAGTTTCTCTTGTGTAGCCTCAAGGACCATTATCTACCACTACT
AACTACAACTACTACATTTTCACAGACAAAAGAACATAAGATAAGAGTTCAAAGATCATATAAACACCAAGAACTCATCATCTTTT
GGAGACAACCACTAATATCAACATCGACATTGACACAACGATCTTGAACCCTGAAGTATCCCAAAAGTTCTGCTTCTCTCCAGACA
CAGATTCATTCATCTGTTTCCCAGTAACCTGATCTCTTAGCTCCTTCATCGCCTTGTCTCTCTTCTCCCCCATCCTCTGCAGCTTT
CTTGTCTGGCTACGAGCTTCTTGCAGACAAAACTCCATCTTCAGCACCTTCTTCCTCAACTCTTTATCTGTTCTTCTTTGCTTCTC
CAACTGAGATTCAAGCTCCTTGGCCTTGAGTTTCCAGTGACCTGACATTAACCTTATCTCATCTTTCAGTTTTGCAATCTCTTCGT
CTTTTGCACCCAACAGCATGTTCACTCTCTCCAAGTTCTTTGGAGAAACCTCTTCCACAAGTCTCCTTAGCTCGCATTCCGTGTCT
TTCCCTGACTTCGCAATCTCACGCTCGATTCTCGTGACCTCGTCCCTCAGCTGCTTCTGAGAACACTCTCTCGTCTTTAGATCTCT
CTGAAGATTATCAAGCTGGTGGCCTAGCTGAGTCACACGGTCTTCGTGCTCTCGTAGCAAACATGTTTTATCGTCGAGTTGTTCTG
AAAGCATTGTGCACTGGAGCTGTGCGGATTGAGCAGAAGCAGAGCTTGTTTCTGCCAGTTCCTTTGTCAAAGCTAGCTGAGATCTC
AGGTCGTCTACTTCTTCCAGAAACTTTGTAGCAGCAGATGTTGAAGCTTCGAGCTGACAATTCCTATCTTCCAATGTCTTCTGCAA
TTTACAGATCTCCCTTTCCATGTTCTTAGCTTTTGTCTCTGCTTCTTTTCTAGAGAGGCTTTCTTTAGCAAAGAATTGTTCTTGAG
AAACCAAACGGCCTTTCACTTGCTTAAGCTCAGCCGCCATAGACACCACGTTGCGCCTGAAACTCTCTTTCTTCCCATCTAAATCT
CTCAGAAGCGGATCCACCGCCTTTTTGGAGGAATCAGACATCAGGGTCTTGTCGGATCTCTCATAAAAATCAGTGAATGAGTTCTT
GTGGAAACTAAAGAAGATGGAGAGAGAGAGAGAGTTCAGCAGGAGAGCTTTGTTTTCGAAATCGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568487 uncharacterized protein [Arabidopsis thaliana]14127e-154
XP_002874325 hypothetical protein ARALYDRAFT_326902 [Arabidopsis lyrata subsp. lyrata]13543e-147
NP_566262 uncharacterized protein [Arabidopsis thaliana]11331e-121
XP_002276639 PREDICTED: hypothetical protein [Vitis vinifera]11331e-121
AAD09217 plant IF-like protein [Arabidopsis thaliana]11277e-121

Swiss-Prot top hits (Blast detail)Scoree value
Q62209 Synaptonemal complex protein 11515e-009
Q03410 Synaptonemal complex protein 11515e-009
Q60563 Synaptonemal complex protein 1 (Fragment)1471e-008
P02565 Myosin-31443e-008
Q9Y623 Myosin-41363e-007

TrEMBL top hits (Blast detail)Scoree value
Q9M9L3 F10A16.12 protein11331e-121
Q9ZRC5 Plant IF-like protein11275e-121
B9N420 Predicted protein10801e-115
Q5PP55 At5g2677010721e-114
B9RFQ5 Putative uncharacterized protein10683e-114

Arabidopsis top hits (Blast detail)Scoree value
AT5G26770.2 unknown protein14132e-156
AT5G26770.1 unknown protein14132e-156
AT3G05830.1 Encodes alpha-helical IF (intermediate filament)-like protein.11344e-124
AT5G26770.3 unknown protein10727e-117
AT1G09470.1 unknown protein8891e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information