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Information for unigene UN03947

FASTA Sequence
Unigene ID: UN03947Length: 919 SSR 
GGAATAATCATTACCCCTTTCATCTTTAACTTCGTCTTCTCCACATCTTAACTTTTTCTTTTCTCGATTTCGCATTTTCTGTCTGC
GTTTGTGTCTCAGATCGACGGTGAGTGAGCAGATAGTGAAGAAGAAGACAAAACGATGTCGTTTACAGGAACGCAGCAGAAATGCA
GGGCGTGTGAGAAGACAGTGTACCCAATGGAGCTTCTCTCAGCTGATGGTGTCCCTTTTCACAAGTCTTGCTTCAAGTGCTCTCAC
TGCAAATCCACCCTTCAACTAAGCAATTATTCATCGATGGAAGGTGTGTTGTACTGTAAGCCTCACTTTGAGCAGCTCTTCAAGGA
GACTGGTAGTTTCAACAAGAACTTTCAATCACCTGCAAAGCCATTAACTGACAAGCCAACACCTGAGCTGACAAGGACACCTAGCC
GAGTCGCTGGAATGTTCTCTGGAACGCAAGATAAATGCGCCACTTGCAGTAAAACCGTGTACCCTATCGAGAAGGTAACCGTGGAG
AGCCAGTGTTACCACAAGTCCTGCTTCAAGTGTTCCCACGGAGGCTGTCCCATCTCTCCTTCCAACTACGCGGCTCTGGAAGGGAT
CTTGTACTGCAAACACCATTTCGCTCAGCTTTTCAAGGAGAAAGGAAGTTACAATCACCTCATCAAATCTGCTTCCATCAAACGCT
CCGCCGCCGCCGCTGCGGCCACTGCTGCTGCTGCTGCTGATGTAGAAGCCGTCCCTGAATCTTAACTTTGAAACAAAAGGTGTTAC
TACCAAAACTGGTTTCAGATTGTTTTTCTTTGTGTCTGTAATGTGTTACTCTCACTTATGCATGTTCTTGTCTTTTCATAACGAAC
CATGTTTAAAACTCTCTCAAGTTTGTTCTTGTTGTGAACCTAACTACTATGCAGCTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879831 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]9941e-105
NP_181519 LIM domain-containing protein [Arabidopsis thaliana]9832e-104
NP_191136 GATA type zinc finger transcription factor-like protein [Arabidopsis thaliana]9277e-098
XP_002876333 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]9251e-097
BAH20111 AT3G55770 [Arabidopsis thaliana]9204e-097

Swiss-Prot top hits (Blast detail)Scoree value
P29675 Pollen-specific protein SF35582e-056
Q4U4S6 Xin actin-binding repeat-containing protein 22454e-020
Q4KM31 LIM domain-containing protein 22321e-018
Q1LZA7 LIM domain-containing protein 22293e-018
Q9BT23 LIM domain-containing protein 22293e-018

TrEMBL top hits (Blast detail)Scoree value
O04193 At2g39900/T28M21.69832e-104
Q9M047 AT3G55770 protein9275e-098
B9DH94 AT3G55770 protein9203e-097
B9SWP2 Pollen-specific protein SF3, putative8801e-092
C6TL24 Putative uncharacterized protein8747e-092

Arabidopsis top hits (Blast detail)Scoree value
AT2G39900.1 LIM domain-containing protein9839e-107
AT3G55770.1 LIM domain-containing protein9327e-101
AT3G55770.2 LIM domain-containing protein9327e-101
AT3G55770.3 LIM domain-containing protein9327e-101
AT3G55770.4 LIM domain-containing protein9327e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  25%
 
112  50%
 
101  25%

Unigene MembersMember information