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Information for unigene UN03977

FASTA Sequence
Unigene ID: UN03977Length: 1456 SSR 
GGATCAAACACATTCATTCATTCATTCAAGATACGTTTTAGATACAGACAAAGAAAAAGAGCGTGTAAACAAATCCATCATACAAC
TTTCGTTCTCGGAGAGAGAGAGAGAGAAAAAAAAAGGGAGAAAGCATGAATGATTAGGAAGATAGGTTCGGCATGAAAAGCCCAGA
ATCTGGACTGTGTTGCTCTTTCCAGATTTTACCGGTGACTCTAAGTTTAGGCTCTTTCCTATCTCCACCGGAAAAAAAGAAAGCCA
TGTTTCTCTGGATGATGAGACCGTCGTTGCTGTCTCTTACTTTCCTGTGGCTATCTCTGATGCTTCTCGGTGTTCCTTCCCATGTT
AGCTTCCTCCCACTGCCTCCCACTTCCAAGCTGTAGCTGTAGCTCCGTGCTTCTTCCTCGTCCCCCATGAATCTCAGGAACGCCAT
GTATACCGGACCCATCCCGAGCTGGAACGCCTCAAAATGGAGGCAGAAGTATTGCCCAAAGCACTGAAACACGGTTAGCATCCAAG
TAGCGTTCTCTACTTCACGCGGATTGGACTTGACATAACGGTGGTTAAAAGTGGAACCAGCGTGCATGTCGACCTTGTGATCATCC
CTGAGATGGGATACAAGGAAAGGGATGTCTCCAACGACACCACACTCGGAGCCAGCGTAAGGACAACCGTAAGGTCTGAAGTTACA
GAGAGACTCGTGCTTGAGTTTGCTGTAGTAAGGGAAAATCTCAGGGCATCCGAGGTTGTAAAACTTGCAAGGCAGCTCAAGAGACT
CGGCGACTTTCTCGAGAGCTAAACATCTTATGTCTCCAAGCTCTTGTCTACAAGTGGGACACCGGTTATGCACTCTCACTTTACAG
GTCGAGCATAACGTGTGTCCATTATGACACTGGTGAATAGGAGGATACATAGAACAGGTACAGACAGGGCACTCAAGGAGCTCGTA
GACGCTAGTTGCGGTGGGACCGACGATATTGGTAACGACGGTGGGAGAAGCGGCGGCGGAGGAGTGGCTCTTGGTGGAAGAGAAGT
GGAAAGTTCCTCCGTTGTGATGGACCTCATCGTTCTGACTGCTTCTCGTCGACGATTCCATACTATCCGTCTCCATTTCCCACCAC
AATTTGATTAAAAAAAGAAACAAATACAAAATCGCCTAAATTCAAAGAAAAAAAATTAGGTCAAAAAAATCCCCTTTATAGAAATC
TCTCTTCCCGGAAATGAAAGTTCCTTTCTTTCAAACTCGATTAACAGGAGCAAAAGCGATATGAGAATGGATTCGATTAGACAAAT
CTGGAAAAGAGAGAAAAGGGAAAGAATGTTGAAAGACAAAAAAAAAAACTGATTTTTTTTCTTTCAGGGAAACCAAATCGGGTCCC
TCTGTCTCTCCCTTCCTTCCTCTCTCTCGCTCTATCGTCACCGTGTCTGGGAAAGGCGGATGGATGCTTTCTTCGTTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194517 E3 ubiquitin-protein ligase SINAT4 [Arabidopsis thaliana]15651e-171
XP_002869535 predicted protein [Arabidopsis lyrata subsp. lyrata]15623e-171
XP_002318423 predicted protein [Populus trichocarpa]14082e-153
XP_002321406 predicted protein [Populus trichocarpa]13966e-152
ACU18504 unknown [Glycine max]13868e-151

Swiss-Prot top hits (Blast detail)Scoree value
Q9STN8 E3 ubiquitin-protein ligase SINAT415656e-173
Q84JL3 E3 ubiquitin-protein ligase SINAT313452e-147
Q8S3N1 E3 ubiquitin-protein ligase SINAT513424e-147
Q9M2P4 E3 ubiquitin-protein ligase SINAT211642e-126
P93748 Putative E3 ubiquitin-protein ligase SINAT111491e-124

TrEMBL top hits (Blast detail)Scoree value
B3LF90 At4g2788015651e-171
B9I5C4 Predicted protein14082e-153
A9PF22 Predicted protein13964e-152
C6T9K2 Putative uncharacterized protein13866e-151
B9RSF5 Ubiquitin ligase SINAT3, putative13776e-150

Arabidopsis top hits (Blast detail)Scoree value
AT4G27880.1 seven in absentia (SINA) family protein15655e-174
AT3G61790.1 seven in absentia (SINA) family protein13452e-148
AT3G58040.1 SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding11642e-127
AT2G41980.1 seven in absentia (SINA) family protein11499e-126
AT5G53360.1 seven in absentia (SINA) family protein10306e-112

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
191  33%
 
181  33%

Unigene MembersMember information