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Information for unigene UN03993
| FASTA Sequence |
| Unigene ID: UN03993 | Length: 998 |
SSR | | CCCCCCCAATGAATGATCCCCAAAACCAAAGTTTACAAGCGGCTTTTGCTTTCGGAAATGTTGACCACCAACCAAAGTGAAAAAAA
AAAAAAACTAAATGACAAAATGTTTAAAGCTTAGGTCACATATGCGTAACGTTTACAACTATAAATTAAAGCTTTGGCCTCACACT
ACATTCCTCCTTCAGAAGACAATGTTCTTCAAGTCATCTCATGGCTAATAGCATTTCTCACATCTCCCCACACTCTGTAATAACAA
CAGCAAGCTTAGGACGGTTGTTTGGTCCAACAGCCACGTTCTCAATCTTCCGCACCACCAATAACCCATCTCCCAGCACTCTCCCA
AAGACAACATGCTTGTTGTCAAGCCACTCGCATTTTGCACAGCTGATGAAGAACTGGCAACCATTAGTGTCTGGCCCACTATTTGC
CATGGAGAGCAATCCAGGTCCAGTATGTTTGGCAGTAAAATTCTCATCAGCGAACTGGTGGCCATAGATTGACATGCATCCACTAC
CATCATTCTAGCAGAGAATTTAGTTAAAAGATGAGAGAAGAAACCAAAGAGATTCTTTCTAGTAAAAAAATGCAAAAAAGGCGTAG
AGTAAATAATATTAAACAGACCTTAAGAAAATCACCACTTTGAATCATAAAATCCTTGATGACTCTGTGAAACTGACATTCTTTGT
AACCAAGTGGCTTCCCAGCCTTTCTGAGTTCACCAGTACAGAACTGCCTGAAGTTTTCAGCAGTTTTGGGGGCAATGTCGGCGAAA
AGCTCCATCTTGATACGACCAGCGGGGATACCACCAATAGAGACGTCGAAGAAGACGACTGGGTTTTTAGGGTTGGGTGGTCTGAC
GTGCCACTCCACGTTTCCACCGCCGCTTGCAGGAGCTGCTGTTGGTCCCGCCACGATTCCTCCTCCTACAGAACTCATCGGAAATC
AAACTTTTCTTCTTCTCTCTCTCTCTCTCAGTGACTTCGGAGAAAACAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181407 peptidyl-prolyl isomerase H (cyclophilin H) [Arabidopsis thaliana] | 510 | 2e-049 |
| XP_002881613 hypothetical protein ARALYDRAFT_482885 [Arabidopsis lyrata subsp. lyrata] | 503 | 1e-048 |
| XP_002513025 peptidyl-prolyl cis-trans isomerase h, ppih, putative [Ricinus communis] | 467 | 2e-044 |
| ACJ83867 unknown [Medicago truncatula] | 466 | 2e-044 |
| ACU13238 unknown [Glycine max] | 465 | 3e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0P5D0 Peptidyl-prolyl cis-trans isomerase H | 384 | 3e-036 |
| O43447 Peptidyl-prolyl cis-trans isomerase H | 384 | 3e-036 |
| P52018 Peptidyl-prolyl cis-trans isomerase 11 | 374 | 5e-035 |
| Q5KA96 Peptidyl-prolyl cis-trans isomerase H | 368 | 2e-034 |
| Q9D868 Peptidyl-prolyl cis-trans isomerase H | 302 | 1e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVJ4 At2g38730 | 510 | 1e-049 |
| B9RG73 Peptidyl-prolyl cis-trans isomerase | 467 | 1e-044 |
| B7FGI8 Peptidyl-prolyl cis-trans isomerase | 466 | 2e-044 |
| C6SVG5 Peptidyl-prolyl cis-trans isomerase | 465 | 2e-044 |
| B9GX77 Peptidyl-prolyl cis-trans isomerase | 463 | 3e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38730.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 510 | 7e-052 |
| AT3G62030.1 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) | 278 | 6e-025 |
| AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase | 278 | 6e-025 |
| AT3G56070.2 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase | 278 | 6e-025 |
| AT3G62030.2 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) | 278 | 6e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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