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Information for unigene UN03995
| FASTA Sequence |
| Unigene ID: UN03995 | Length: 1428 |
SSR | | GGAAAAATTATGTATATTATATATATTCAAGAACAAGGACAGGAACAAAAGGTTCTTCAATATAAAACAACCCATATGTGCTAAAT
TCAGCAATAAAACCCCCTACGAAATAGTATCAAATTAAAATACTAAAGAAGAAGAAGAAAATACATTAAGATAATTGTCCATGATT
TGAAGTCTTCAAGCTGAATTTAGCATATGTTCCCGTCCGTCTTGACAACCACTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTTTTATCACCTGAAGCTGCTGCCCCCAAACGTTGGCGTCCAAAAGTCGACGGTTGTTTCATTAGC
CACCGGAAAAGTGCTTGATACGGGAACGAGACAAAAACCGTGTGCTCTTAGTTCTTGATTCTCGTTTCCATTTTGATTCTTACCAG
ATTCCTGATGTTGTTGTTGGACGGAAGCACCTTGTTTCATGTATGGAGTGCTGAAAACAATGACTTGATCATGAAGAAACTTGATG
TACTCTATGGATTCTTGGAAAACAGATGCAGTATCTTTCCGAAAGGTGAAACTAGCTGTGTAAATGAAGTAATTTGGTCCCTTAGA
TTCTCTTTTCTCACCTTAAAAGTTGGCAGTGGTGAAGGCGTACTAATTCTCTGTTTCTTCGACGGGGATTCATCATTCTTTGCTCT
CTTTAAAGACTCGCTCTGGCCTTTAGTCTTCTGATTCTTAGTTCTTTCCTCAAGACGAGTAGGTATTGTCTGCGAAGTGGTTATAA
AACTGTTATGCGGCGTGTTGTTTAAGTTAGTGGTTGATGAAGAACTCCAAAAGGGTCGAGAGTTTGTGTTGTTAGAGAAGTTGTTA
ATTATTCCATAAGCAGCTTGATGGTGAGGACTTGTCTTACTACTAGCCCAAGAGAGCTGAGGATCGTTGATTGAACAGCTAGTGGT
AGAAAGGAACCTGTACGGACTCGGTTCCGGATCGTACAAGGTTTGTAACAAGCTCGAGGAAGAAGAAGAAGGTGATGAAGATGAAG
AACAAGCTGGATTAAGAAGATAAGGTGAACTAGTTGTGGATAAGAATCCTTGGCCTTGATAGTGATCTTGCGAGCTTATGAAGCTT
GAGTTTAAGTCTTCTTGTAAAACGGTTTCGTTCCAATCTGAAGAAGAGTTTGAGGAAAACCCTAGACCCATCATTTGCAACGTTGA
GTCAATACTCACGGTGCTTCCTCCGCTGTCGGAATCAGCATCTCGCTGCCCGAAACAAGACGACAATAAATTATCCGAAGGAGACA
TAACGCTCCTTGGCGAGTTCCACCACGCGCCGCCTCCGCTGCCGCAAATTGCTGCCGTCGCTTGAAACTCCTCAGCCATAAAACAG
AATCAGAAATTTTTAATATATGCTTACCCCTTAGTCGTTATTAGACAAAGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_849836 transcription factor bHLH112 [Arabidopsis thaliana] | 960 | 2e-101 |
| NP_564782 transcription factor bHLH112 [Arabidopsis thaliana] | 960 | 2e-101 |
| AAM62823 unknown [Arabidopsis thaliana] | 960 | 2e-101 |
| XP_002886524 hypothetical protein ARALYDRAFT_475161 [Arabidopsis lyrata subsp. lyrata] | 948 | 5e-100 |
| NP_001185284 transcription factor bHLH112 [Arabidopsis thaliana] | 937 | 9e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JL3 Transcription factor bHLH112 | 960 | 8e-103 |
| Q8GXT3 Transcription factor bHLH123 | 280 | 6e-024 |
| Q9FYJ6 Transcription factor bHLH111 | 177 | 5e-012 |
| Q9LT67 Transcription factor bHLH113 | 150 | 7e-009 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 147 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RXX2 Transcription factor, putative | 300 | 5e-025 |
| A5AS17 Putative uncharacterized protein | 294 | 2e-024 |
| A9PFV3 Putative uncharacterized protein | 291 | 5e-024 |
| B9I057 Predicted protein | 288 | 1e-023 |
| B9T877 Transcription factor, putative | 288 | 1e-023 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G61660.1 basic helix-loop-helix (bHLH) family protein | 960 | 7e-104 |
| AT1G61660.2 basic helix-loop-helix (bHLH) family protein | 960 | 7e-104 |
| AT3G20640.1 ethylene-responsive protein -related | 280 | 5e-025 |
| AT1G49830.1 ethylene-responsive protein -related | 154 | 2e-010 |
| AT3G19500.1 ethylene-responsive protein -related | 150 | 6e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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