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Information for unigene UN03998

FASTA Sequence
Unigene ID: UN03998Length: 1860 SSR 
CGGGCGAAGCATTTTATGCATTCATTAACTAAAGAAGATAATAAAATAGAGTTTGGCCGTTTTACAAAGAAAATCAAAACATTTGC
TTTCGGCTATATTATGATCCATTAGACAGAGGTTAGAACTTTTATTTAGAAGTTTGCTCCCCAGTTCGGATGACCAAGTTGTGATT
GCTGATAAGCACCGAGTTGAGAGGGGGGAAAGGGCACAACCCCAACTCCAACATTACCACCAAGCCCAGGTCCCATGTGGTGTGGA
TTCGCCATTGCACCAGGTTGTGGCGGATGGAAGAGACCCTGGAACTGCATTTGAGGAGTTTGTGCAGCGGCGTTGAAGGATGGATG
TGATGTATGGGATGGTAAATAAGCACCATGAGGCGTTTGACCAGCTACGTTGTAATATGGAGGAGACTGAAGGCTTGAAAGATCTC
TTGGATTCTGAGGGTTTGGAACGTAAATATTTCCATCTTTGTATTTCATGCGAGATGGATCTTCAAGACCCATGGCGTTTCCAACT
ACATTGGGAGAATTAATCTGATACCCATTAGGGCTGTTGTAAGTCCCAAAACCAGTAGGACCACCTGTTGGGACTGGCTTGAACTG
CTGGATGCCATACTTGACACCATTTGAACCAGGATGAGAACCACCACCTCCAGGCATCAGAACATAGCTATTGCCATTTGACGGGT
GTGCATACGCTGCTGGGTTACCTGAGTAGCCTGGCATGGGGATCTGTGGGACATAGACTTGGGAGACGAACTGACGATAAGGCATA
AGATTGGGAAAATGTGCAACTTGAACCTGCGGGTACATCTGTTGCATTGACGCTTGTTGTTGTTGTTGTTGTTGCTGCTGTTGCTG
CTGCAGCATGGGAATCGTAGATGAAGGGCCATTGTTCACCATTTGAGTACTTAATACCTCTTGCTGAGATGGTAATCCTTGTCCTC
GTACGTTTTCACTCACTGCAGGACTAAAATACGGTAAGTCATAACTACCGTGATTACCATATGCAGAAACTTTTTGCAACTCAGGA
GGATCTTGCTGCTGTTCAAACTCTGAAGGAGTATAATGTGGACCATTCCTATTGAGCAATTGAATTTCCGAGTACTCCTCCAAATT
GTCAGATCTGTTAGCCTCCTTCTCTTCAGGTAACTGTTGCTCAGATGCCACCGACACACGTGAGTCAGATTCAGAAACTCTGACAT
GATCATCAAGAATATCGATAGACTTATCCCCCGGACTATCTGTTATAGTCTCTGGAGAAGAAACTGGCGAACTCCGATCAGTTTCT
CTAAGTTCTTCTGAAGAGCATGATTTCTGGAAAGCAGATTCTGGATTTATTGAAGAACTAAACTCTTGAACAAAGCTACCAAAAGT
AAGCTGACATCGGTCAGTCTCTGGGACACGAATATGATCTGCGATGATGACATTCTGGCTTTCACTGATATGAGCGTGCGAAAGCT
TATCTTGAACCTTAACAGCCTCCGATTCCATGTTTATGGAACTATCATCAGAACGACCAGCCTGAGACTTTGCAGGTGTTCCAATT
ACTCCCGGATTATGTCCAACAGGTTTCTGAATTGCTTTAGGCTTCCATTCTTTGTTCTGTGAGACTACTTTTGTATGGCCACCAAC
TTGTTGTGTTCTAGCATTTTGGCTTCCTCTGTTTCCACGCTGCCTGTTCAAGAGAGGCCTATTCTTTTCCCCACCGCTGGGCAAAA
CAGACTCTCGTAAAGTAGTTTGACTGACTTGATCAATCTTTGAATTTGGGGAAGATGATCGATATGCATTTGTAGTCCCAGTCTTT
CTAATAGAGGACCCTGACAAAGAATCAGCAGATGGATCTTTCCAACATTTCAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001078149 uncharacterized protein [Arabidopsis thaliana]22516e-251
NP_188015 uncharacterized protein [Arabidopsis thaliana]22391e-249
XP_002885002 hypothetical protein ARALYDRAFT_478805 [Arabidopsis lyrata subsp. lyrata]22221e-247
BAB02329 unnamed protein product [Arabidopsis thaliana]21673e-241
CBI35892 unnamed protein product [Vitis vinifera]14658e-160

Swiss-Prot top hits (Blast detail)Scoree value
Q9VDR1 Mediator of RNA polymerase II transcription subunit 251258e-006

TrEMBL top hits (Blast detail)Scoree value
Q0WUK0 Putative uncharacterized protein At3g1399022514e-251
Q8L7T4 AT3g13990/MDC16_1122399e-250
Q9LVK1 Gb|AAF13084.121672e-241
A5AXI2 Putative uncharacterized protein14485e-158
B9S5S8 Putative uncharacterized protein14441e-157

Arabidopsis top hits (Blast detail)Scoree value
AT3G13990.2 unknown protein22522e-253
AT3G13990.1 unknown protein22404e-252
AT3G07660.1 unknown protein1401e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  50%
 
81  25%
 
211  25%

Unigene MembersMember information