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Information for unigene UN04007

FASTA Sequence
Unigene ID: UN04007Length: 962 SSR 
GTTGCACCACAAAGCTGCTCCCAAAAGCTTCGTTTTCCTCATGCAGCCCATCCAATTTCCAAAGCTCGGTGTCTTCGTCTTCAATG
GGGGGGATTTCTACAATTTCGTCGTTGCGTGCGAATCTGCCACGTATTCCAGGTCTACTGTCCGCCAACGTTTTCCTGCATGCATA
CTTTATAGTTTTGGTAAAGTTTCTATGGTTACGTTTAGCTCTGTACTTTGAGATCTTCTCTTTACGTCCTCAGCACTGTAACGTCC
CACCTTCAAGTTCTGCGCGTCTGGAAACGGCTCCGATGATCTCTGCTCAACAACATTCTTTCTTGTGTTCTGCAAATCTCCTGTGC
TGTAGACTCGTCGCATCATCTGACCGGAGAAGAAGTCATTCTCGGGCGAGTTCAATGTATTGTAATGGAGATTAAAAGAATCCATT
ATCTGAACGTTGCTGAACGGAATCTGATTCGGTTTTCCGTCGACGGAGTTGGTGCTAAAGCTTCTCTGCATATACCTTCCTGCATT
CTCTATTGCACTGTAGCTTCTCGCCATTGATGCAACCGTTTCCGTTTGATTATGACCGGAGCCGCCGTAATACTGCTCTGTTTTGA
CGGCGTCCGAGAAATTTGGATACAGTCCGGTGGGAGTTTGATGAGAGAGAGTTAGGGTTCCAAGAAGGTCGCTTGGAGGAGATGAA
GAGAGGATATGAGGGGTGAAATGGTCAAACATGTTGAGAGATTCATCAACAGAGTAGAGTTCGTTGTTGCAGAACAAATCTGTTGT
TGTTGTTGTGTCTGAAGAGAACATATCTGGACTAGAGTTTCGAAAGATTGAGGAAGAAGATGAAGAAGAACCATCAAAGATGTAAA
GATCTGAAGAAGCCACTTTGAAACTGATGAAGTGAAACTCTATTTATGTTCTCTTCTGATGGGTTTCTCTGTTTTAGAACCAAGAC
ATGACAGGTGAAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868599 hypothetical protein ARALYDRAFT_493840 [Arabidopsis lyrata subsp. lyrata]7914e-082
BAB08510 unnamed protein product [Arabidopsis thaliana]7621e-078
NP_198954 CCT motif family protein [Arabidopsis thaliana]7621e-078
AAV68884 hypothetical protein AT5G41380 [Arabidopsis thaliana]6893e-070
NP_176567 CCT motif family protein [Arabidopsis thaliana]2816e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q9FHH8 Zinc finger protein CONSTANS-LIKE 51309e-007
Q940T9 Zinc finger protein CONSTANS-LIKE 41244e-006
O50055 Zinc finger protein CONSTANS-LIKE 11227e-006
Q9SK53 Zinc finger protein CONSTANS-LIKE 31227e-006

TrEMBL top hits (Blast detail)Scoree value
Q5Q0A4 Putative uncharacterized protein7627e-079
Q9FN62 Gb|AAF07370.17627e-079
Q5Q0A3 Putative uncharacterized protein6892e-070
Q67ZF8 Putative uncharacterized protein At1g638202814e-023
B9GWU0 Predicted protein2582e-020

Arabidopsis top hits (Blast detail)Scoree value
AT5G41380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63820.1); Has 952 Blast hits to 949 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 2; Plants - 890; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).7624e-081
AT1G63820.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).2812e-025
AT1G04500.1 zinc finger CONSTANS-related1971e-015
AT5G59990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41380.1); Has 918 Blast hits to 918 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 885; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).1962e-015
AT2G33350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: zinc finger CONSTANS-related (TAIR:AT1G04500.1); Has 7691 Blast hits to 4729 proteins in 129 species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 114; Plants - 918; Viruses - 0; Other Eukaryotes - 6478 (source: NCBI BLink).1891e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information