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Information for unigene UN04025

FASTA Sequence
Unigene ID: UN04025Length: 1158 SSR 
GGAACCTCTCTCAGCCGAGCAAAGTCTCGGAGCCTCTTCTACTTCTTCTTCTTCTCCCATGGCGGCAGGTCTCTCAACAGCCCTTA
CATTCAAACCGCTCCACCGCGCTTTCTCTTCTTCCTCCTCTTCCAGTCTCCGTCTGCATCACCCCACATCCTTAACTGGATTCCCG
TCGTCTCTCCTCCGGTTCAGAGGATTATCCGTCTGCTACGTCGTCTCGGATCGGAGGCAGAGCTCTCCTATCGACAAAGATGACAG
TCCTCCCGAGAGCACGGAGACAACAACAACAACAACAACAGCCATAGACGCGGTGTACCTGGCGCTGCGTTTAGCTGAGAAGCTGG
AGCGGAAGAAATCTGAGAGGTTCACTTATCTGATCGCCGCAGTGATGTCGAGCTTCGGTATCACTTCGATGGCTATTATGGCCGTT
TACTACAGATTCTCTTGGCAGATGGAGGGTGGTGAGATCCCAATGTCGGAGATGTTCGGTACATTTGCTCTTTCTGTTGGGGCTGC
TGTTGGCATGGAGTTCTGGGCAAGATGGGCTCATAAAGCTCTTTGGCACGCTTCTTTATGGAATATGCATGAGTCACATCACAAAC
CTAGAGAAGGTCCTTTTGAGTTGAACGATGTGTTCGCCATAATCAACGCTGTTCCTGCCATTGGTCTCCTCTCTTACGGTTTCTTC
AATAAGGGACTCGTTCCTGGCCTCTGCTTTGGCGCTGGGTTAGGAATAACAGTGTTCGGAATCGCCTACATGTTCGTCCACGATGG
TTTGGTGCACAAGCGCTTCCCTGTAGGTCCCATCGCTGACGTTCCTTATCTCCGAAGGGTCGCCGCTGCTCACCAGCTGCATCACA
CAGACAAATTCGACGGTGTGCCATATGGGCTGTTTCTTGGACCGAAGGAATTGGAGGAAGTTGGAGGAGATGAAGAGTTAGAGAAA
GAGATAAGTCGGAGAATCAAGATGTACAAAAGGGGGTCTGGTTCCGGGTCGACTTCTTGACTTTAAAACATGTTTTAATTAAGTCT
CAAACTTTTTTTTTGTCTTGTATCATGATCTGAAATACGATCTATGTTTATAAATCCTATAAGCCGATTTTGATTTTAAATACTAA
AATAGAAGCCATGCTAATTATGATTAGCCCGTGGTCTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACS45170 beta-carotene hydroxylase [Brassica rapa subsp. pekinensis]14502e-158
XP_002867597 beta-carotene hydroxylase [Arabidopsis lyrata subsp. lyrata]13444e-146
NP_194300 beta-carotene hydroxylase [Arabidopsis thaliana]13311e-144
AAC49443 beta-carotene hydroxylase [Arabidopsis thaliana]12754e-138
AAS55552 putative beta-carotene hydroxylase [Brassica rapa]11742e-126

Swiss-Prot top hits (Blast detail)Scoree value
Q01332 Beta-carotene hydroxylase2501e-020
P21688 Beta-carotene hydroxylase2455e-020
P54973 Beta-carotene hydroxylase2009e-015
Q44262 Beta-carotene hydroxylase1981e-014

TrEMBL top hits (Blast detail)Scoree value
C6KE02 Beta-carotene hydroxylase14502e-158
Q9SZZ8 Beta-carotene hydroxylase13311e-144
Q96297 Beta-carotene hydroxylase (Fragment)12753e-138
Q6QE72 Putative beta-carotene hydroxylase11742e-126
A8B8E2 Beta-carotene hydroxylase11723e-126

Arabidopsis top hits (Blast detail)Scoree value
AT4G25700.1 BETA-OHASE 1 (BETA-HYDROXYLASE 1); carotene beta-ring hydroxylase13631e-150
AT5G52570.1 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); carotene beta-ring hydroxylase11863e-130
AT4G25700.2 BETA-OHASE 1 (BETA-HYDROXYLASE 1); carotene beta-ring hydroxylase9086e-098
AT5G52570.2 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); carotene beta-ring hydroxylase4248e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
61  33%

Unigene MembersMember information