 |
Information for unigene UN04063
| FASTA Sequence |
| Unigene ID: UN04063 | Length: 1005 |
SSR | SNP | GGATCGTTTCTTCTATAGCACACGTTTTATAACCCAGACTCTCTCTCTCTCTTTCTCTCTCTCTCCGGAGAAAGAAAAAGTAAAAG
AAGGCTCTTTCTGATCTCTCTCTTTAACTTGGATCGTTTCGTGAATCTGTTTCTCCTTAGATCCAAACCATTTCAATCTCATAAAA
ATATCGATTTCGCGTTTCTGGTCTGTCACAATCAGAAGCCAGAAAAAAGGGGATGGCGGCGGTGAATGGGTACCAAGGAAATACTC
CGGCGGAGACAACGCCGGCAGCCACCGGATCGAAGCATCCTGCTCCTCCGACTAAGACCGTCGATAGCCAATCCGTTCTCAAAAGG
TTGCAATCTGAACTAATGGGTTTAATGATGGGAGGTGATCCGGGGATATCGGCTTTCCCAGAGGAAGACAACATATTCTGCTGGAA
AGGAACTATCACAGGAAGCAAAGATACTGTGTTTGAAGGAACTGAGTACAGACTCTCACTCGCTTTCTCCAACGATTATCCTTTCA
AACCTCCCAAGATCAAGTTTGAGACTTGCTGCTTCCATCCTAATGTGGATCTCTATGGCAATATTTGCTTGGATATTCTTCAGGAT
AAATGGTCATCCGCCTATGATGTGAGGACGATATTACTCTCGATTCAAAGCCTTCTTGGAGAACCGAACATCAGCTCACCATTGAA
CAACCAAGCAGCTCAGCTTTGGAGCAACCAAGAAGAGTATAGGAAGATGGTGGAGAAGCTCTACAAACCTCTAAACGCATGATTCT
GAAAAGCCTCTTGTAACTTGGATGCAAGAGTGTCACTGCATTCAAAAGATCATGCTACTTTTTTTTATTAAACTTTGTAATCTCAA
TTACAAACCTCTAAACGCATGATTCTGAAAAGCCTCTTGTAACTTGGATGCAAGAGTGTCACTGCATTCAAAAGATCATGCTACTT
TTTTTTATTAAACTTTGTAATCTCAATTCGTGCCAGTCTTAGCAATCAAAACCAGTAAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885355 ubiquitin-conjugating enzyme 19 [Arabidopsis lyrata subsp. lyrata] | 925 | 1e-097 |
| NP_566653 ubiquitin-conjugating enzyme E2 19 [Arabidopsis thaliana] | 910 | 7e-096 |
| NP_564572 ubiquitin-conjugating enzyme E2 20 [Arabidopsis thaliana] | 879 | 3e-092 |
| AAM67229 E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] | 873 | 1e-091 |
| XP_002513536 ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis] | 792 | 4e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJZ5 Ubiquitin-conjugating enzyme E2 19 | 910 | 3e-097 |
| Q8L7T3 Ubiquitin-conjugating enzyme E2 20 | 879 | 1e-093 |
| Q54XS6 Probable ubiquitin-conjugating enzyme E2 C | 535 | 1e-053 |
| Q95044 Ubiquitin-conjugating enzyme E2 C | 512 | 5e-051 |
| Q9VTY6 Ubiquitin-conjugating enzyme E2 C | 505 | 3e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RIG7 Ubiquitin carrier protein | 792 | 2e-082 |
| A9PD53 Ubiquitin carrier protein | 777 | 1e-080 |
| A9PAG1 Ubiquitin carrier protein | 765 | 3e-079 |
| C6T5N5 Putative uncharacterized protein | 754 | 6e-078 |
| A5BHQ5 Ubiquitin carrier protein | 749 | 2e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20060.1 UBC19 (ubiquitin-conjugating enzyme19); ubiquitin-protein ligase | 911 | 2e-098 |
| AT1G50490.1 UBC20 (ubiquitin-conjugating enzyme 20); ubiquitin-protein ligase | 880 | 9e-095 |
| AT3G20060.2 UBC19 (ubiquitin-conjugating enzyme19); ubiquitin-protein ligase | 718 | 5e-076 |
| AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase | 326 | 2e-030 |
| AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase | 325 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
