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Information for unigene UN04072

FASTA Sequence
Unigene ID: UN04072Length: 1257 SSR 
GAAAGAAAGTATTAAAAAGACGTTCACGTTTCTTCCTCCTCACACCAGCATAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGAAG
AAAGCAAGCAGGAAACATAGAGATTCTTTCTTGTCCTTTCAGTGAGGTTTTTGGGTTTAGCGAATCGATTGATTTAGAAGGGTGGC
GAGTTCTGCCGAGTGTTGGGAATTGTCCGGTGAGAGGAAGAAGGTGCTTGAGAAGAAGCCGAGCTTCTCGCAGACATGTAGTCGAT
TGAGTCGTTATCTCAAGGAGAAGGGTAGCTTCGGAGATCTCAGCTTAGGGTTGACATGCAACCCCGACCTCAATGGAGCTTTTGGT
GTGTCACGTGAGCCCACGATGATGAATCTCTTCCCTTCTACGACTGCTCAAGACGTTAAACCGAAGAGTGATATGATTCCTCGGCA
ATCAAGCTTTTCTTCTTCCTCTTCCCCTGGTGGAGCCAAGGAAGAAGTCGATAAGATCATGGATACTAAATCTGTGAAGGTGGAGC
CTCTATCTGCTCCCTTGACCATATTCTACAGCGGTCAAGTTATGGTGTTTGATGATTTTCCTGCTGAGAAAGCCAAGCAAGTCATT
GACTTGGCTCACAAAGGAATTGCTAAAAGCTTCACATCTGAGCTGAACAGTAACCAGATTGCTTATACTCAAAACATAGCCAAGAA
TCATAAAGAGATTGCTTCCACTACCCCAAATCCAGTTCCTATTCCTGTGAAAACCGCTGCACCAGAGCCAATCCAAGCCAACAAGT
CCTCTTTAGCTTGCGGTGGTAACGAACTCCCAATTGCTAGAAGAGCTTCACTTCATCGATTCCTTGAGAAGAGAAAGGATAGGATT
TCATCAAAGGCACCGTACCAGATAGACGGTTCTACCGAAGCATCTTCCAAGCCTAACACATCTTGGCTCGGTTCCCAGTAATCTCC
TTGAGTTGAGACTCCTCCTTTTGATGATGCTCCCATCGTTTACTATAATATCAAGAAGCTCTACTGATTTCACTCCTAGGAGTTTT
GTTGTCTGTTCAATGCGCCAGAAAAAAAAAACTCAGTATATCTGTACGAAACTAATCCTTATAGTTTTGCTACTTTTTTTGGGTTT
AAAGCCATTGTGTTATTATAGACCCTTTTCCTCTGCTGTTCTCAGCATTTGCTTGCAACTTTTGTAAGAAACATCAGTTTCTTATT
TATTTATTTTTGGTTGTTGTTGTTGACGACCTTAATATCAGCTTACTTTAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889001 hypothetical protein ARALYDRAFT_476633 [Arabidopsis lyrata subsp. lyrata]8688e-091
BAJ33919 unnamed protein product [Thellungiella halophila]8562e-089
NP_565096 protein TIFY 10B [Arabidopsis thaliana]7853e-081
AAM64554 unknown [Arabidopsis thaliana]7764e-080
NP_564075 protein TIFY 10A [Arabidopsis thaliana]6124e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7M2 Protein TIFY 10B7851e-082
Q9LMA8 Protein TIFY 10A6122e-062
Q9C9E3 Protein TIFY 11B1936e-014

TrEMBL top hits (Blast detail)Scoree value
B9MT14 Predicted protein4242e-039
A9PIL0 Putative uncharacterized protein4232e-039
C6TEN6 Putative uncharacterized protein4223e-039
C6TAX9 Putative uncharacterized protein3945e-036
C6T4J6 Putative uncharacterized protein3122e-026

Arabidopsis top hits (Blast detail)Scoree value
AT1G74950.1 TIFY10B7869e-084
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding6183e-064
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding2294e-019
AT1G72450.1 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)1935e-015
AT5G20900.1 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)1174e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
67  100%

Unigene MembersMember information