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Information for unigene UN04077

FASTA Sequence
Unigene ID: UN04077Length: 823 SSR 
GGAAAGAAGTTAATATTTCAGACCACAGATCTTTGTCTCTTCTCTCTCTACTACTTTTGTTCGATGGCACCAAAGCAGGCGGACAA
GATCGAGAACCCTCCCGTTGCCTCTTCCAGTGAAGAGGAAGAAGAAGAGTCTGGTTCATCTGGAGAAGAATCCGACTCTTCCGATG
AAGAAGCTGGAGATGTCCAGTCCAAACTCACTCAGAAACCTGCTCCTCCTCCTCCTGCTTCTGCTACCAAGAAGTCTGAATCCGAC
TCCGAAGAAGGCGAAACCGAATCAGAATCCGACTCCGACTCCGAGCCTGCGACCAAGACTAAGCCTCTCAACACTGTCGTGACCAA
ACCGATCCCACCAGATAGCTCCACAGCGAAGAAGCGTTCTCTGAAGCAAGCGGATAACAACAACGAGCCTAAGAAGAAGGCAAAGA
CATCATCGACCACTGAGCAAGTGAAGAAGAAGAAGCCAACAACAACAACAACAACAAAAGATGAAGATGTCAAGAAGAAGATATCC
GGAGAAGAAGCCAAGAAGATGTTGTTTCAGTGGCTGTTCAGCGAGACGGACGAGATCGCGATGCTTCAAGGCTTTCTAGACTTCAC
TTCCACCAAAGGAGACCCTTACGAGAACATGGACGCCTTCTGCGATTACGTCAAGACCTTGATCGACTTCAACGCTTCCAAGGCTC
AGATCGTTACCAAGCTCCAGAGGCGTAAGAAGAAGTTTGCGAATATAGTCAAGAACGCCCTCAAGAAAGGAAGACTGAAGACAAGA
TCGCGTGCGCTAAGATCTCGACCAGAAGCCTTCGAGTGTCGAGGAGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869685 hypothetical protein ARALYDRAFT_914061 [Arabidopsis lyrata subsp. lyrata]4779e-046
NP_194251 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]4446e-042
AAN65068 putative protein [Arabidopsis thaliana]2994e-025
AAK62441 putative protein [Arabidopsis thaliana]2994e-025
NP_192035 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]2431e-018

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 11593e-010
P15771 Nucleolin1522e-009
Q14978 Nucleolar and coiled-body phosphoprotein 11432e-008
Q5UQ57 Probable ubiquitin-conjugating enzyme E2 L7091352e-007
O14164 Eukaryotic translation initiation factor 3 subunit C1315e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SB42 Putative uncharacterized protein AT4g252104444e-042
Q8H0X7 Putative uncharacterized protein At4g252102993e-025
Q94F05 Putative uncharacterized protein F24A6.502993e-025
O04608 A_IG002N01.32 protein2438e-019
O81314 F6N15.6 protein2151e-015

Arabidopsis top hits (Blast detail)Scoree value
AT4G25210.1 transcription regulator4442e-044
AT4G01260.1 transcription regulator2435e-021
AT4G00390.1 transcription regulator2032e-016
AT1G66420.1 transcription regulator1655e-012
AT5G23180.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.04 four leaves visible, petal differentiation and expansion stage, D bilateral stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: transcription regulator (TAIR:AT4G01260.1); Has 16 Blast hits to 16 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1271e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information