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Information for unigene UN04102

FASTA Sequence
Unigene ID: UN04102Length: 1238 SSR 
GGAAAATAAGAAATTAGGTTAGTCAATCATCCCCCAATTCTTCTTCCCTCGCGTTCGGTGCCCTGTTCATCTTCCGTCCTGTGGAT
CGTGATCTCACGGTTGAAGCCAACCTTACTGCCTCGGAGTCGCTACCTCTCTCTCTCTCTCCGTCGGAGTCACTACCTCTCTCTCT
CCGTCTTTTCGTCAAACCCATCTCTGATACATCACGCGAGCGCAGCAGGGATTGGTGGAAGCAACGATGGGTGTATCAAACAAATG
ATGGAACTGCAACTACGTCTGAAGATTTAAAGGAGAATCTGAACCAATTCATAAACTCTATTCAGAAGACTTTGGGACTCCTTCAT
CAGTTACGCCTTACTGTCTCTTCTTTCACACCCGCCTTCTCAGCCTCAACTCTCTCGTGTCGGAGCTGAATAGCATGGCTAAGTTG
TCCGAGAAATGCAACATTCAAGTCCCCATGGAAGTTCTTTGTTTGATTGACGATGGAAAGAACCCGGACGAGTTTACAAGCAAGGG
ATGTTATTAATAGCTGCATCAAGTTACAAAAGGCAAAACTGATGCTTTTAAGGATTTGAGAAAACATATTCTGGAGGAGCTTGAAG
AGACTTTCCCTGATGAAGTTGATAAGTATAGAGAGATCCGTGCTGCTTCTGCGGCTGAAGCGAAACGGCAGGCGCAATCTCAAAGT
GTCTTGTTACCCAATGGGGATGCTAAGGTCAAGAACGAGATTCAGAAGCTCTATCATCACCATGGATGCAAAAGGAAAAGGAAAAA
TGGTGGAAGAACTTCCGATGATGGGTGAAAGCTTCACCTCCAGTGAGAGTCTTCCCCTCCTTGCTGCAACCGATCATGAAACCGAT
CATGAGGATGTGGGTGATGCAAAAGTGACCACATCTCTGGGAGAACTTCAGATCGGTGAAAGCTTCACCTCCAATGAGAGTCTTCC
CCTCCTTGCAACAGAACATGCGGAGGAGGTTGTTCTTTTGGATCTCCCCCCCCTTGTTGTTGACAACAATGTGCACATTGATGATG
AGGCTCAGGAGGAGGTGGAGGAAAACGTTTTGCCCGATGTTGGAGCTCACAACATCCGTAACGTCCGAGGAAGGCCTAAGAGGAGA
CCATTCACTGAGCCCCTCTCCCCACGCTCTCAAGCTAGGGCCAATGAGAGGGAAGCCAAGAAAGAGCGCTCAAGAAAGCTGAGAAC
AGAAGAATCAAAATTAAATGTGCCAACCACGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564254 Mediator complex, subunit Med10 [Arabidopsis thaliana]4332e-040
NP_973916 Mediator complex, subunit Med10 [Arabidopsis thaliana]4224e-039
NP_199006 Mediator complex, subunit Med10 [Arabidopsis thaliana]4101e-037
XP_002868569 hypothetical protein ARALYDRAFT_493793 [Arabidopsis lyrata subsp. lyrata]4036e-037
XP_002280081 PREDICTED: hypothetical protein [Vitis vinifera]3982e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q16G71 Mediator of RNA polymerase II transcription subunit 101561e-009
Q7Q5R5 Mediator of RNA polymerase II transcription subunit 101542e-009

TrEMBL top hits (Blast detail)Scoree value
Q93WN1 At1g26660/T24P13_44331e-040
Q3ED58 Putative uncharacterized protein At1g26665.24223e-039
Q9FHZ2 Genomic DNA, chromosome 5, P1 clone:MJC204107e-038
B9GK75 Predicted protein3982e-036
B9GY35 Predicted protein3963e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G26665.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).4338e-043
AT1G26665.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).4221e-041
AT5G41910.1 RNA polymerase II mediator complex protein-related4104e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information