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Information for unigene UN04123

FASTA Sequence
Unigene ID: UN04123Length: 827 SSR 
GGATGTTCTTGATCAGCAGCATCTCATGCGTGTTTCCTCTGCTTCTTTGTGTTTGACTACTCTGAGATCTAAGTTTGAAAAATAAT
GGGCGAGGATCAGCGTGACAAAGGACTCTTCCACCACTTAGCAGGTGGACACTACCGACCTTACGGTCATCATGGTTATAGTAATC
ACGGTCATCATGGTTATGGAATTCCTTATGCATACCCTGCTCCTCCTCCTCCGTATGGTTATCCACCAGTTGCTTATCCTCCACAC
GGTGGTTACCATCCAACCGGTTATCCTCCTACCGGTTATCCACCTCACGGTTATCCATCTCACGGACACCACCACCACGGAGGTAT
AGGAGCGATGATCGCGGGTGGAGCGGCTATGGCAGCTGCAGCAGTTGGTTCTCACCACCACGGACACTATGGTCACCATCACGGTC
ACGGCTATGGGTACGGGTATCACAAACACGGTAAGTTCAAGCATGGGAAGTTCGGGAAACGCTGGAAACATGGCATATTTGGGAAG
CACAAGGGAAAATTCTTCAAGAAATGGAAGTGATTTGTTTCCTGAAAAAGATTGATCCAATCCAGAGACTATACATTATATATATA
TATCACTATGTAACAACAATAAATGTTCAAGTCTCTGAAAATATTACATAGTTATTGTGAGCCTTAAGAGGCTAGAATGTCATAAT
TTTTCTTTCTCGGTTTGGTATTATCAAGCTTTTCTTTTGTTTTATATCCTCATGTATAAAGTTTGCTTCATGATCCACTTGTTTGA
AAACGATCTTTAATACTGAAGGAGAATCTTCAATAAACCACTCATTTTCTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873841 expressed protein [Arabidopsis lyrata subsp. lyrata]6614e-067
NP_197267 glycine/proline-rich protein [Arabidopsis thaliana]6589e-067
BAE98420 glycine/proline-rich protein [Arabidopsis thaliana]6589e-067
XP_002319217 predicted protein [Populus trichocarpa]4625e-044
XP_002268577 PREDICTED: hypothetical protein [Vitis vinifera]4114e-038

Swiss-Prot top hits (Blast detail)Scoree value
P37705 Glycine-rich protein A32704e-023
Q28640 Histidine-rich glycoprotein (Fragment)1862e-013
P09241 Rhodopsin1692e-011
Q6BH13 Metacaspase-11513e-009
P04929 Histidine-rich glycoprotein1486e-009

TrEMBL top hits (Blast detail)Scoree value
Q0WWS8 Glycine/proline-rich protein6586e-067
Q9LF59 At5g176506586e-067
B9I6F5 Predicted protein4623e-044
D4P3K3 Glycine and proline rich protein 33933e-036
D4P3K4 Glycine and proline rich protein 43673e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G17650.1 glycine/proline-rich protein6593e-069
AT5G45350.1 proline-rich family protein3573e-034
AT5G45350.2 proline-rich family protein3573e-034
AT4G19200.1 proline-rich family protein3521e-033
AT1G31750.1 proline-rich family protein3072e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
82  67%

Unigene MembersMember information