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Information for unigene UN04150
| FASTA Sequence |
| Unigene ID: UN04150 | Length: 901 |
| SNP | CGTGAAAACCAACAACTTTTTAAAACGAATGTTCAAGAAAATCCCTAAAGAGAAAGATGATGAAACATAGAGAAGTATCTCAGTCT
GAAAAGACAGGAACCTAACAAGAACACTCCAAATTCAGAAGCAGGAACGTAGTGTTTCCAGGTACTAACATAATTGGAGATAACTG
TAGCTAAAACGTAAAAAGATAAACGAAAGAACAAAAGTTACTGAAGGAAACAAAAAGTCTGCAATCATCTCTCTTCTGGAAATCCA
GGAAACTAGTCAGGTCTGTCTCTAGTTTGTGGATGGTGGTCGAGTGATTCGTGGCCTCACTGGTGTCTTTGATGGACTTACCCTTA
TGGGTTGGGATCCAATGACCATCCCGCTGCAATTGAGCGCCCTAGTTGCACTATCCGCCAGAGCAAACTCAACAAAAGCAATGCGA
GTTGAATGCAGTTGATCCCCAAGAAGCCTCAGACGAGTTACCTCACCACATGCTGACTCAAAGAAGTTTCTCATATCAGCTTGAGA
AACCTTTTTGTCAATGTTTGTGCAATAGATGGTCCTTGAACACATCTCCCTTTCATCTTCAGACCTAGGAAGAAATGTGGGATTCA
CTGGAAGAATAGCAGTTTTGGAGGGTAAGACCCTCACGGGATAGTACCCGAGCATCGTTCCACCAAGGCTTAAAGCTTTATGTGCG
CCCTGGTCATCAGCAAACTCGACAAACGCAAACCGAAGAACTGAATGTGGATCCCCACAAATTCGACAGTCAACAACTTGTCCACA
GTTACTAAACAAGGCAGCAAGACCCTCCTCAGTCACACTCTGGTCAATGTCAGAAACATACACTGTTCTTCTAATACTATCCTCTC
TCTGAGCTTTTGAAATTCTTCCAGTCAACCTCCTTCTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188063 CTC-interacting domain 9 protein [Arabidopsis thaliana] | 1030 | 8e-110 |
| BAD43546 putative RNA-binding protein [Arabidopsis thaliana] | 915 | 2e-096 |
| NP_175769 CTC-interacting domain 8 protein [Arabidopsis thaliana] | 915 | 2e-096 |
| NP_001031182 CTC-interacting domain 8 protein [Arabidopsis thaliana] | 915 | 2e-096 |
| XP_002298913 predicted protein [Populus trichocarpa] | 914 | 2e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8WXA9 Splicing factor, arginine/serine-rich 12 | 155 | 1e-009 |
| Q8BZX4 Splicing factor, arginine/serine-rich 12 | 155 | 1e-009 |
| Q9JKL7 Splicing factor, arginine/serine-rich 12 | 155 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LRR6 Similarity to RNA-binding protein | 1030 | 5e-110 |
| Q67ZZ8 Putative RNA-binding protein (Fragment) | 915 | 1e-096 |
| Q9C8M0 At1g53650 | 915 | 1e-096 |
| B9GGV8 Predicted protein | 914 | 1e-096 |
| C6TDF4 Putative uncharacterized protein | 909 | 6e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14450.1 CID9 (CTC-Interacting Domain 9); RNA binding / protein binding | 1031 | 2e-112 |
| AT1G53650.1 CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding | 916 | 5e-099 |
| AT1G53650.2 CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding | 916 | 5e-099 |
| AT1G32790.1 RNA-binding protein, putative | 820 | 7e-088 |
| AT4G10610.1 CID12; RNA binding | 769 | 6e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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