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Information for unigene UN04151
| FASTA Sequence |
| Unigene ID: UN04151 | Length: 956 |
SSR | | CATTTTTCTTTTCTTTTTCTTGAACAAAAGCTGGATCCATCATTATTCATAACATTACAGAGTCCAATATATGACTCAATGCTAAG
TCATCATTAAAGAAAAACACTCAAAGATTTTGTTTAAGAGTACAGAGTTCTCTCTCTCTCTCTCTTTTTCCTTTTTTGGTAAATGA
TTATTGAGGTGCTAATGCTTTTTGAGAGCATTCATCTTGTCCCTAAGGTAGTAGAGTTTCGCTCTTCTTACCCTCTTCTTGTCCAA
CACCTTAATCTCCCTCAGGTTTGGAGAATACAAAGGGAACATGGATTCGACTCCCACTCCAGCCACAAGCCTTCTAATCCTAAACG
TAGAGTTAAGACCAGCATTACGCCTTGCTATCACAATTCCTTTTACGATTGAAACACGCCTCTTGTTCTCAGGCACTTCCACTTTT
AGTTGCACAATGTAACCGGGCCTTATCTCCGGTATCTCTCTACTAGTTCTCACTTCCTCCACAGCCTCCTTGTCTACGATCTGCAT
GATATGCTTGGCGGTTTTATCAAGCCTCTTGAACTTGATTCTTGGAGGCGCATCAGGAGCTGACACAGGAAATCCTTGAGGAACAG
ACTCTCCAACGGTGGAAAAGCACCTCGATGAATACGTAAAGTCTTGTCTAGGTAGTGCGGAAGAGAAAGAAGCCGCCTTTGTCAAC
GAGCTAATGAGATAGGACGCTGCTGGCGAATCGAAAGCTCTTGTGGAACGGAATGAATCAAACCCTCCTAGCCTCCTCGATTCATT
ATTATCAGACCAGCTTGGAGAAGAAGTGAAACGAGGGAGAGTGCCATTGGAGATGGAGAAGCGGTTCCTCTGAAGCAACCTTGTAG
TGCTTCGAATCGATTGCATTTTCTTCCGCAAAAGAGAGGATTCGATCTAATAATGCCCTGAAGGTTTTACAGCGGAGTTTGAGAAA
CCTACAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_196736 Ribosomal protein L19 family protein [Arabidopsis thaliana] | 828 | 2e-086 |
| XP_002871497 ribosomal protein L19 family protein [Arabidopsis lyrata subsp. lyrata] | 826 | 4e-086 |
| NP_192900 ribosomal protein L19 [Arabidopsis thaliana] | 818 | 3e-085 |
| NP_564213 Ribosomal protein L19 family protein [Arabidopsis thaliana] | 769 | 2e-079 |
| XP_002277262 PREDICTED: similar to putative L19 ribosomal protein [Vitis vinifera] | 594 | 3e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82413 50S ribosomal protein L19, chloroplastic | 356 | 5e-033 |
| Q8W463 50S ribosomal protein L19-1, chloroplastic | 352 | 2e-032 |
| Q8RXX5 50S ribosomal protein L19-2, chloroplastic | 348 | 4e-032 |
| Q2VZV5 50S ribosomal protein L19 | 249 | 1e-020 |
| A9HS58 50S ribosomal protein L19 | 244 | 5e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LYF5 AT5g11750/T22P22_140 | 828 | 2e-086 |
| Q9T0D0 At4g11630 | 818 | 2e-085 |
| O48691 At1g24240/F3I6_17 | 769 | 1e-079 |
| B9S1T8 50S ribosomal protein L19, putative | 589 | 8e-059 |
| B9RAT4 50S ribosomal protein L19, putative | 577 | 2e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11630.1 ribosomal protein L19 family protein | 842 | 2e-090 |
| AT5G11750.1 ribosomal protein L19 family protein | 839 | 5e-090 |
| AT1G24240.1 ribosomal protein L19 family protein | 798 | 3e-085 |
| AT4G17560.1 ribosomal protein L19 family protein | 352 | 1e-033 |
| AT5G47190.1 ribosomal protein L19 family protein | 348 | 4e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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