Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN04188

FASTA Sequence
Unigene ID: UN04188Length: 593 SSR 
AAACTAAATACTTATTTAGAAACTAATCAAAATAACAAAGTTGTGTACCCTCAGATTTACAAAGACAAACGCATTAGGGAGAGATA
GTAAGCAACAATACAACTGAAGATTCTTAGATTCATGATCGTAAACAAGACTATATAAAATGTGAAAGATATTTAAAAAGGTTTCC
GAAGTTGTGAACGGAACAGAACAGAACAAAAGAACCAAGACACAGAGGTCGTCAAGAAACTGGAGGCAACAATGAGAAACTCCTGA
GTTTTCACCATTTTCTTTTTTCCGGTAAACTCTTTGCTTCTTCTCTCTCTCTCTCTCTCTCTCCCTCTTCCCTTCTCTTCTAGACA
GAAGGGAGATACTTGTTGAGGTTGAAAGGAAGAGAGTAGAACTCTTCACTTCTTGTGTCACCTTTGAAAGATCTAAACTTGTCCCA
CCAATGCTTTCCTCTGTCTTTCCTTATCGATGAATCTTTCTTGTGCAGTGTGTTGTCCAAGAAGAAGGCCACCATGCCAGCAACAA
AAGGTTCTGATGAGAACGGGACATTCACCATATCGTTGAACCAACGACCGCCTGTGTGGACAGGACCATAGCCTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201094 nucleobase-ascorbate transporter 6 [Arabidopsis thaliana]4523e-043
AAK59508 putative permease 1 [Arabidopsis thaliana]4523e-043
AAL76261 putative permease 1 [Arabidopsis thaliana]4523e-043
XP_002864824 hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata]4523e-043
ABK93255 unknown [Populus trichocarpa]4292e-040

Swiss-Prot top hits (Blast detail)Scoree value
Q27GI3 Nucleobase-ascorbate transporter 64522e-044
Q8RWE9 Nucleobase-ascorbate transporter 53851e-036
Q0WPE9 Nucleobase-ascorbate transporter 73562e-033
Q8VZQ5 Nucleobase-ascorbate transporter 82972e-026
Q94C70 Nucleobase-ascorbate transporter 22658e-023

TrEMBL top hits (Blast detail)Scoree value
Q8SA83 Putative permease 1 (Fragment)4522e-043
A9PA52 Putative uncharacterized protein4291e-040
B9IEN1 Nucleobase ascorbate transporter4291e-040
B9RB71 Purine permease, putative4291e-040
B9I369 Nucleobase ascorbate transporter4121e-038

Arabidopsis top hits (Blast detail)Scoree value
AT5G62890.1 permease, putative4531e-045
AT5G62890.2 permease, putative4531e-045
AT5G62890.3 permease, putative4531e-045
AT5G49990.1 xanthine/uracil permease family protein3867e-038
AT1G60030.1 xanthine/uracil permease family protein3572e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
71  50%

Unigene MembersMember information