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Information for unigene UN04190
| FASTA Sequence |
| Unigene ID: UN04190 | Length: 801 |
SSR | | AAGAAAAGACCAAATTAAAATAAAAGTAATAATTAGAACCAAAGTACTTGAAAAAACTTAATACAAATCATAACATCGGCCACAGT
AATTTCACACATGGAGGAAACAACACATTCGGTGTGAAAAATATTTTATTGAAGGAGAGAAAAAGAGAGATAGAGAGAGACATCAT
CATCATCATCACCACATGTTGGATTTGGTTTGTCTTGCGATCTTGAACCACTCGGTGTGGAAAGAACCTTCAACATCAGTCCTCTC
ATAAGTATGAGCACCAAAGTAATCTCTCTGAGCTTGTACAAGGTTCGCCGGCAACCTCTCTCTCCTGTAAGAATCAAAGTAGGCCA
GACTCGCTGACATACCGGGAGTGCTTATACCCGAGTTGATGCTCAAGCAGACCACTCTTCTCCAAGCCGACTGCCTCTCGATGATC
TCTTTCGCAAACTCGGGATCCACCAAGAAGGTTAGCCAGCTCCGCGTTCCTGTCGTAAGCTTGCTTGATCCTGTCCAAGAAGATCG
CTCTGATGATGCACCCTCCTTTCCAGATTCTCGCCAGCTCGCCTAGCTTAAGGCCCCATCCTTTCTCCATGCTCTTGGCGCGGATC
AGGTTCATCCCTTGCGCGTAGCTGCAGATTTTCGACGCGTAGAGCGCCTTCCTCACGTCATCGATGAGCTGTTTCTTGTCGACGGT
TTGGTGGGTTAAGACATCTCCAAATCCACCTTCCTTGAAGACTTTAGCGGCTTCAACACGCTCGTCTTTCACCCGCTGAGGAACCT
CGCGTCGAGAGATGACTCAATGGTGGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADG38366 AT3G02360-like protein [Neslia paniculata] | 500 | 2e-048 |
| ADG38360 AT3G02360-like protein [Capsella grandiflora] | 497 | 4e-048 |
| ADG38361 AT3G02360-like protein [Capsella grandiflora] | 492 | 1e-047 |
| NP_186885 6-phosphogluconate dehydrogenase [Arabidopsis thaliana] | 489 | 3e-047 |
| XP_002882225 6-phosphogluconate dehydrogenase family protein [Arabidopsis lyrata subsp. lyrata] | 489 | 3e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P21577 6-phosphogluconate dehydrogenase, decarboxylating | 295 | 5e-026 |
| Q5HP42 6-phosphogluconate dehydrogenase, decarboxylating | 271 | 3e-023 |
| Q8CP47 6-phosphogluconate dehydrogenase, decarboxylating | 271 | 3e-023 |
| P52209 6-phosphogluconate dehydrogenase, decarboxylating | 265 | 1e-022 |
| P52207 6-phosphogluconate dehydrogenase, decarboxylating | 258 | 9e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D6PPT4 AT3G02360-like protein (Fragment) | 500 | 1e-048 |
| D6PPS8 AT3G02360-like protein (Fragment) | 497 | 3e-048 |
| D6PPS9 AT3G02360-like protein (Fragment) | 492 | 1e-047 |
| Q9FWA3 6-phosphogluconate dehydrogenase, decarboxylating | 489 | 2e-047 |
| Q1KUX5 6-phosphogluconate dehydrogenase, decarboxylating | 481 | 2e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02360.2 6-phosphogluconate dehydrogenase family protein | 489 | 1e-049 |
| AT3G02360.1 6-phosphogluconate dehydrogenase family protein | 489 | 1e-049 |
| AT5G41670.1 6-phosphogluconate dehydrogenase family protein | 371 | 7e-036 |
| AT5G41670.2 6-phosphogluconate dehydrogenase family protein | 371 | 7e-036 |
| AT1G64190.1 6-phosphogluconate dehydrogenase family protein | 365 | 3e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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