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Information for unigene UN04257
| FASTA Sequence |
| Unigene ID: UN04257 | Length: 1280 |
SSR | | ACCAAATGCTTAACTTATACTATTAGTTAAGTAGAAATGTCTCTAGGAAGCTGACTAAACCACATACCTTAACCTTACAAAAACCA
TGAGCAGTAGTTCTTAAACCAAAACAAAAACAGGACATTTTTTGTGGACTTTTTTTTGTTCCTGATAAAAAACGTTATAAAGATAA
TAAGCGTACACATTCAAAACTTTAAACCTGTCTTCAGACCTCACTCTTCTTTTTCTTTTTATCTTTCTTTTCTTTCTTCTTGGCAG
GCATTTCTGTTTCTTCCTCCTCGTGTTTCCTCTTCTTCTTCTTCTTTGAAGGTTCCTCGGTTTTGGGCTCTTCGGCTTCAGCTTCT
ACTTCTGTTTTCTTCTTCTTCGACTTCTTCTTAGAAGGTTCCTCGGTTTTGGCTTCTTCTTCCTCTGCATCATCAGCCTTCTTCTT
TTTCTTTTTATCTTTCTTCTCCTTGGCACCGTTCTCAGCTGCGGAAGTTTGTCCAAGAAGAGAGTCTGCAGCAGTGTTGTAAGTCT
TAGCAGGAGTGATCAGACCTCCAGATCCAATCTTCTTATCCTTGTCATAAACTTCAATCTTTGGTTTGCCTTTAGCTGAACCAGAG
AGACGTCCCATGTCTTTCCCTTCCAGACTTCTCAACCGTGTTTCAACCTTTAAACGGCTTTCAACTCCCATAGTGTTGTCTTCGCT
ATCACCAAGAGCATCACACCGGATAGCAAGGGCAGCTTTTGCAGCTAGTGAACGTGAGATCTTAGCCTTGTCCTTGGGTGCAGCTT
GGCCAACAAGAGAAGTATGGTAAATCAGACCGTATTTAGGAGTGTTGTGTTTAGTCTTGAGGGCTCTAAATAGAGCCTTCTCAGCT
CCAAGAATCTGAACCGTGCTCCCAGGCTGCTTTGAGAGGTTCAACAGACTACCGCCGTGAGAAATCAGACGAGCACCGACTAGCTC
TCCAACGAGTGCAGTCAGATTCGGTGCGATTGTGTTCATCCTACTCTTCAGGTAGTCATAAAGCTGAGCTCTGTACTCGGCAAGAG
ACAGAACCTGGTCGCAGAGTTCCCTGATGTGCAACAAATCAAGGTCGCTGACTTCAGTTCCCATAGATATCACAGAAGCCTCTTTT
AGTTCCGCTTCAACTTCACCAGCCAATATCTCAGAGAAGTCTAGCTTTGCTGCATTGATCCGATCCCCCATTAATTTTACAGACTT
AGCATACAGGATATTGTCGGAGATGATCTTAGCAAGCTCGGGAAAATGCCAACCGTACCATTCACGAACTCTCATA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 1531 | 1e-167 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 1490 | 6e-163 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 1448 | 4e-158 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 1446 | 8e-158 |
| XP_002273273 PREDICTED: hypothetical protein [Vitis vinifera] | 1273 | 9e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 1531 | 4e-169 |
| Q9MAB3 Probable nucleolar protein 5-2 | 1448 | 2e-159 |
| Q9Y2X3 Nucleolar protein 58 | 873 | 9e-093 |
| Q9QZ86 Nucleolar protein 58 | 866 | 6e-092 |
| Q6DFW4 Nucleolar protein 58 | 853 | 2e-090 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65334 SAR DNA-binding protein-1 | 1260 | 2e-136 |
| B7FLW5 Putative uncharacterized protein | 1244 | 1e-134 |
| Q9AV96 MAR-binding protein | 1243 | 2e-134 |
| O65335 SAR DNA-binding protein-2 | 1239 | 5e-134 |
| A2XGN8 Putative uncharacterized protein | 1216 | 2e-131 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27120.1 SAR DNA-binding protein, putative | 1531 | 4e-170 |
| AT3G05060.1 SAR DNA-binding protein, putative | 1450 | 1e-160 |
| AT5G27140.1 SAR DNA-binding protein, putative | 837 | 1e-089 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 654 | 2e-068 |
| AT3G12860.1 nucleolar protein Nop56, putative | 628 | 2e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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