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Information for unigene UN04275

FASTA Sequence
Unigene ID: UN04275Length: 966 SSR 
GGACCTCTGAGACGAAGTAGAGATGAAAGCAATGAGTCTGATTACGAATAAGGTTGAGAGAGCCGAGCTTAAACCTGGTGATCACA
TCTACACTTACCGAGGCGTCTTCGCCTATTCTCACCACGGTGTGTTTGTTGGTGGTTGTAAGGTGGTTCATTTCAAACCTGAGCAA
ACCTTGAAAGCAGCTCCCACACTCTCTTCTTCTTCTTCTTCAGTTTCAGAGGTTAATGATTCTTCAGAAGCTCCTTGCCCTACATA
CCCTGACTGTGGATTCAAACAACCAAACAGTGGAGTACTACTCTCTTGCCTTGACTGCTTCCTCAAGAACGGTTCTCTCTACCGCT
TCGAATATGGAGTCAGCTCATCCATTTTCCTAACCAGAGTCCGAGGTGGTACCTGCACAACCGCTCCATCTGACCCCTTTCAGACA
GTTGTCCACAGAGCAATGCACCTTCTCCAGAACGGGTTTGGTAATTACGACATCTTCCAGAACAATTGCGAAGATTTTGCTCTTTA
CTGCAAGACGGGACTGCTCATTTTGGATAAGAACGGTGTGGGAAGAAGCGGTCAAGCCAGCTCCATTTTCGGCGCTCCTTTAGCTG
CACTCCTCTCTTCACCTCTCACGCTGTTGATTCCGAATCCTGTTGGTGTAGCGACAGTCACTGCTGGGATGTATTGTATGAGCAGG
TATGCTACTGATATAGGTGTTAGAACCGATGTGATCAAGGTTCCCGTTGAGGATTTGGCTCTGAACCCTGGTATTAAAACCCTCAA
GAAAAGGTGAAAAAGCTTATGGCTCTTGCATTTGCAAGTGAATATAGATTCTATCATGTACATAAGACTGGCCAGTTTTTTTAGCT
ATGATCTTGATTTGTCCTTGATCTCATCTCTTGTTTTCTATTGAGAAACTGTAAAGATTCTCTAGGTTTTATTGTGGTTTCCAACA
TTATCAAGATTTAGTTCTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875007 hypothetical protein ARALYDRAFT_490474 [Arabidopsis lyrata subsp. lyrata]11714e-126
NP_680550 NC domain-containing protein-like protein [Arabidopsis thaliana]11688e-126
ACU19633 unknown [Glycine max]9762e-103
NP_563621 NC domain-containing protein-like protein [Arabidopsis thaliana]9708e-103
AAM64633 unknown [Arabidopsis thaliana]9681e-102

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3EAE0 Uncharacterized protein At4g00905.111686e-126
C6TCT1 Putative uncharacterized protein9761e-103
Q29PY0 At1g012259705e-103
Q8LBP8 Putative uncharacterized protein9689e-103
B9SBD5 Putative uncharacterized protein9643e-102

Arabidopsis top hits (Blast detail)Scoree value
AT4G00905.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 84 Blast hits to 83 proteins in 19 species: Archae - 0; Bacteria - 10; Metazoa - 6; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).11683e-128
AT1G01225.1 NC domain-containing protein-related9972e-108
AT5G06370.1 NC domain-containing protein6451e-067
AT3G02700.1 NC domain-containing protein5805e-060
AT5G16330.1 NC domain-containing protein4443e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information