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Information for unigene UN04323

FASTA Sequence
Unigene ID: UN04323Length: 1150 SSR 
GGGTGTTTCTTCTTCTTCCCCAATCTCCTTCCAAAGTCTCTCTCTATAATCGTGTCTTTCTCTCTCCATGTCCGAACGCATCCTGT
CTCAAAAACCATCGATACAAACCTCGATCCTTCTCCACTAGCAACTGATCTACACGTCAAACAAAACGGTCTCGCGCATCTCTCTG
TACAGCTATTATGGCCGCCGTCTCCTCCGACCCTCGCACCGTCGAAGAGATCTTCAAGGATTACACCTCTCGCCGCGCCGCTCTTC
TCCGTGCTCTCACCAAAGATGTTGATGATTTCTACTCTCAATGCGATCCGGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAAT
GAGTCGTGGGAAGTGAATCTACCGGCGGAGGAAGTTCCACCGGAGCTACCTGAGCCTGCGCTTGGTATCAATTTCGCTAGAGATGG
TATGCAGAGGAAAGATTGGCTCTCTCTTGTTGCTGTCCATAGTGACTGTTGGTTGCTCTCTGTTTCTTTCTACTTTGGTGCTCGCC
TTAATCGCAACGAGAGGAAGCGGCTATTCAGTCTGATCAACGATCACCCAACTCTCTTTGATGTAGTGACTGGTAGGAAACCAATC
AAAGACAACAAGCCAAGCTCAGATTCCGGAAGCAAATCCAGAAACGGTGGCACTAATAGATCAATAGAAGGGCAGCCAAAGAGCAC
AACACCAAAGCTGATGGAAGAGATGTACGAAGAGGAGGAGGATGAAGAAGAAGAAGACGAGCATGGAGACACTCTCTGTGGAAGCT
GCGGAGGCAATTACACACAAGATGAGTTCTGGATCGGCTGTGATGTCTGTGAACGTTGGTACCATGGCAAATGCGTGAAGATCACT
CCCGCCAAAGCAGACAGCATCAAGCAGTATAAATGCCCACCTTGCTGTGCAAAGAAAGGAAGACAGTGATTGATCATCATCATCTC
CCAGAGACTCTGGTTATCATGTCTTAAACGATATATTAATCAACCTTCCTTCTATCTTTTGTTTTTTAACCGTTTTAATTTTAAAG
CATACAAAACTCTCTCTCTCTTTGGATCTCCGTAAAAGGAATTCAAGAAGTTGAGTGTGTAGCAACAACAACTGTTTTAAGTATTA
TTATTATTCAGATAAGAAAACTGGTTTGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884835 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]12154e-131
NP_187729 alfin-like 2 protein [Arabidopsis thaliana]11993e-129
XP_002873214 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]10792e-115
NP_196180 alfin-like 1 protein [Arabidopsis thaliana]10731e-114
XP_002265093 PREDICTED: hypothetical protein [Vitis vinifera]10003e-106

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g262108324e-088
Q12830 Nucleosome-remodeling factor subunit BPTF1433e-008
Q9W352 PHD finger and CXXC domain-containing protein CG174461254e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SRM4 At3g11200/F11B9.1211992e-129
Q9FFF5 At5g0561010738e-115
Q3EB90 Putative uncharacterized protein At3g11200.210021e-106
A0FK64 PHD4 (Fragment)9941e-105
Q6Q7P5 Nucleic acid-binding protein9358e-099

Arabidopsis top hits (Blast detail)Scoree value
AT3G11200.1 AL2 (ALFIN-LIKE 2); DNA binding / methylated histone residue binding12213e-134
AT5G05610.1 AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding11093e-121
AT5G05610.2 AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding11093e-121
AT3G11200.2 AL2 (ALFIN-LIKE 2); DNA binding / methylated histone residue binding10242e-111
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding8541e-091

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  75%
 
71  25%

Unigene MembersMember information